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Job DescriptionP37596
Confidence99.94%DateThu Jan 5 11:55:42 GMT 2012
Rank77Aligned Residues286
% Identity15%Templatec2q7vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of deinococcus radiodurans thioredoxin2 reductase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40 .........50.........60.........70.........
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Query Sequence  NGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDE. . . YNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQT
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Template Sequence  YDVVIIGGGPAGLTAAIYTGRAQL. . STLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDE
Template Known Secondary structure 

STT
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TTGGGGG
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B

STT
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B
TT


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   910.........20.........30.. .......40.........50.........60.........70.........80......
 
   80....... ..90.........100.........110.........120.........130.........140.........150.....
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Query Sequence  WVTDIDAE. . . . ARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSE
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Template Sequence  VQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVE
Template Known Secondary structure 
TTSSS

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TTTTTTBTTTS
GGGGTT


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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   156...160.........170.........180.........190.........200.........210.........220.... .....230
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Query Sequence  LAMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQATLDRQR. . . . . NIEVDA
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Template Sequence  EGMFLTKFADEVTVIHRRDTLRANK. . . . . . VAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDG
Template Known Secondary structure  TTT
S
SSSS

S
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TT
SSSSTTT


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   167..170.........180.........190. ........200.........210.........220.........230.........240
 
   231........240........ .250.........260.........270.........280.........290.........
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Query Sequence  VIAATGLRPETALARRAG. LTINRGVCVDSYLQTSNTDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL
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Template Sequence  VFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYI. . . YRQLATSVGAGTRAAMMT
Template Known Secondary structure 
S
S
GGGTTTS
B
TTS
B

BTTTB
SSTT
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   241........250.........260.........270.........280......... 290.........300.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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