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Job DescriptionP37596
Confidence99.94%DateThu Jan 5 11:55:42 GMT 2012
Rank76Aligned Residues287
% Identity14%Templatec2q0lA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin reductase; PDBTitle: helicobacter pylori thioredoxin reductase reduced by sodium dithionite2 in complex with nadp+
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYN. . . . KPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFP.
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Template Sequence  IDCAIIGGGPAGLSAGLYATRGGV. . KNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT
Template Known Secondary structure 

STT
..SS
SSSTT
GGGG
S
B

STT

S
B
TTS

S
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   2.......10.........20..... ....30.........40.........50.........60.........70.........
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  QTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELA
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Template Sequence  AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA
Template Known Secondary structure 
TTTTS








BTBTTTS
GGGGTTS

S
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   158.160.........170.........180.........190.........200.........210.........220 .........230.
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Query Sequence  MDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQATL. . . . . . DRQRNIEVDAV
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Template Sequence  IYLANICKKVYLIHRRDGFRCA. . . . . . PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGF
Template Known Secondary structure  TTSS
SSSS

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......T
TTTTTTTTT


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   160.........170.........180. ........190.........200.........210.........220.........230...
 
   232.......240........ .250.........260.........270.........280.........290.........300
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Query Sequence  IAATGLRPETALARRAG. . . . . . LTINRGVCVDSYLQTSNTDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLL
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Template Sequence  FIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFA. . . PKQVVCAASDGATAALSVI
Template Known Secondary structure 
S


GGGB
TTS
BSS
B
TTS
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TT
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   234.....240.........250.........260.........270.........280...... ...290.........300.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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