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Job DescriptionP37596
Confidence98.63%DateThu Jan 5 11:55:42 GMT 2012
Rank255Aligned Residues202
% Identity14%Templatec2gewA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cholesterol oxidase; PDBTitle: atomic resolution structure of cholesterol oxidase @ ph 9.02 (streptomyces sp. sa-coo)
Resolution0.97 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30........
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Query Sequence  GIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PAVVIGTGYGAAVSALRLGEAGV. . QTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNRNI
Template Known Secondary structure  S

STT
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SS



S

TTSSSS

TTS

GGGSBS
SB



TT
GGG

B
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   12.......20.........30.... .....40.........50.........60.........70.........80.........
 
   3940....... ..50.........60.........70.........80.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . DEYNKPDLS. . . . . . . . . . . HVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDID
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Template Sequence  DPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVN. . . . . . . . . . .
Template Known Secondary structure 


B
S
SS

STTGGGGTS

B





TTS
TTT
B...........
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   90.........100.........110.........120.........130.........140.........150........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  AEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HIDTKWFEDTEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVP
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GGGTT




BSB
TTSS
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   159160.........170.........180.........190.........200.........
 
   166...170.........180.........190.........200.........210........ .220.........230.....
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Query Sequence  AVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQA. . . . . . . . . . TLDRQRNIEVDAVIAAT
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Template Sequence  KSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGA
Template Known Secondary structure 
SGGGT
STT

SSSB

TTTTTTSS

TTSS
TT

S
S
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   210.........220.........230.........240.........250.........260.........270.........280.........
 
   236...240.......
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Query Sequence  GLRPETALARRA
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Template Sequence  GSLGSTELLVRA
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   290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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