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Job DescriptionP37596
Confidence100.00%DateThu Jan 5 11:55:42 GMT 2012
Rank27Aligned Residues365
% Identity18%Templatec1zmcG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of human dihydrolipoamide dehydrogenase2 complexed to nad+
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ..
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Query Sequence  MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NK
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Template Sequence  IDADVTVIGSGPGGYVAAIKAAQLGF. . KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR
Template Known Secondary structure 

ST
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SSSSSSSTTT


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   5....10.........20.........30 .........40.........50.........60.........70.........80..
 
   44.....50.........60.........70.........80.........90....... ..100.........110.........120.
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Query Sequence  PDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQ. . WQYDKLVLATGASAFVPPVPGREL
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Template Sequence  LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDE
Template Known Secondary structure 

TT
STT
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TT



S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   122.......130.........140.........150.........160.........170.........180.........190.........200.
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Query Sequence  MLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLL
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Template Sequence  DTIVSSTG. . . . ALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFK
Template Known Secondary structure  SS
....TT
SS

S

STT
SSSSSS
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T
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   163......170 .........180.........190.........200.........210.........220.........230........
 
   202.......210......... 220.........230.........240.... .....250.........260.........270.
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Query Sequence  LKSQLQGLEKTDSGIQAT. . . . . . LDRQRNIEVDAVIAATGLRPETALA. . . . RRAGLTINRGVCVDSYLQTSNTDIYAL
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Template Sequence  LNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQTKIPNIYAI
Template Known Secondary structure  S
TTS
TTS


S




TTSST



TTS




TT
B
SSTT
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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   272.......280.........290.........300.........310.........320.........330... .
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Query Sequence  GDCAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDL. . . . . . . . . . . . . . . . . R
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Template Sequence  GDVVAG. . . . PMLAHKAEDEGIICVEGMAGGAVHIDYNCVPSVI. YTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAANSR
Template Known Secondary structure  GGGSSS....


TT





GGG

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T

GGG
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   319320.... .....330.........340.........350........ .360.........370.........380.........390...
 
   335....340.........350 .........360.........370.......
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Query Sequence  WQINTERQGMVARGVD. DADQLRAFVVSEDRMKEAFGLLKTLPM
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Template Sequence  AKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEA. ALAL
Template Known Secondary structure  T



TTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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