Job Description P37596 Confidence 100.00% Date Thu Jan 5 11:55:42 GMT 2012 Rank 20 Aligned Residues 337 % Identity 31% Template c1xhcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase /nitrite reductase; PDBTitle: nadh oxidase /nitrite reductase from pyrococcus furiosus pfu-1140779-2 001 Resolution 2.35 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D
Query Conservation
Alig confidence																						.	.	.																																								.
Template Conservation																						.	.	.																																								.
Template Sequence		K	V	V	I	V	G	N	G	P	G	G	F	E	L	A	K	Q	L	S	Q	.	.	.	T	Y	E	V	T	V	I	D	K	E	P	V	P	Y	Y	S	K	P	M	L	S	H	Y	I	A	G	F	I	P	R	N	R	L	F	P	Y	S	L	D	.	W	Y	R	K	R	G	I	E	I	R	L	A	E	E	A	K	L
Template Known Secondary structure									S											T	T	.	.	.	T	S							S	S	S	S					S	T	T						T	T	S	S		G	G	G	G		S	S				.						T						S
Template Predicted Secondary structure																						.	.	.																																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	R	G	R	K	V	V	I	T	E	K	G	E	V	P	Y	D	T	L	V	L	A	T	G	A	R	A	R	E	P	Q	I	K	G	K	E	Y	L	L	T	L	R	T	I	F	D	A	D	R	I	K	E	S	I	E	N	S	G	E	A	I	I	I	G	G	G	F	I	G	L	E	L	A	G	N	L	A	E	A
Template Known Secondary structure				T	T	T	T					S	S						S															S	B	T	G	G	G						S															S								S													T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L
Query Conservation
Alig confidence																		.	.																																.	.	.	.	.
Template Conservation																		.	.																																.	.	.	.	.
Template Sequence		G	Y	H	V	K	L	I	H	R	G	A	M	F	L	G	L	.	.	D	E	E	L	S	N	M	I	K	D	M	L	E	E	T	G	V	K	F	F	L	N	S	E	L	L	E	A	N	E	E	.	.	.	.	.	G	V	L	T	N	S	G	F	I	E	G	K	V	K	I	C	A	I	G	I	V	P	N	V	D	L
Template Known Secondary structure		T								S	S	S			T	T		.	.															T	T						S								S	S	.	.	.	.	.					T	T						S
Template Predicted Secondary structure																		.	.																																.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.						.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	R	A	G	L	T	I	N	R	G	V	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N	N	T	P	L	K	L	P	A	M	L	V	K	I	K	T	P	E	L	P	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	R	S	G	I	H	T	G	R	G	I	L	I	D	D	N	F	R	T	S	A	K	D	V	Y	A	I	G	D	C	A	E	Y	S	G	I	I	A	G	T	A	K	A	A	M	E	Q	A	R	V	L	A	D	I	L	K	G	E	P	R	R	Y	N	F	K	F	R	S	T	V	F	K	F	G	K	L	Q	I	A
Template Known Secondary structure					T	T			B	S	S	S					T	T	S	B		S	S	T	T					G	G	G			B	T	T	B				S																T	T							S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	E	T	Q	R	Q	D	L	R	W	Q	I	N	T	E	R	Q	G	M	V	A	R	G	V	D	D	A	D	Q	L	R	A	F	V	V	S	E	D
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	G	N	T	K	G	E	G	K	.	.	.	.	.	.	.	.	.	.	.	.	W	I	E	D	N	T	K	V	F	Y	I	G	A	V	V	F	N	D
Template Known Secondary structure							S	S				.	.	.	.	.	.	.	.	.	.	.	.				T	T												S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320													.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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