Job Description P37596 Confidence 99.92% Date Thu Jan 5 11:55:42 GMT 2012 Rank 81 Aligned Residues 280 % Identity 16% Template c1x31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sarcosine oxidase alpha subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96 Resolution 2.15 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		D	V	L	V	V	G	A	G	P	A	G	L	A	A	A	R	E	A	S	R	S	G	A	.	.	R	V	M	L	L	D	E	R	P	E	A	G	G	T	L	R	E	A	S	G	E	Q	I	D	G	I	D	A	A	Q	W	I	D	A	V	T	E	E	L	A	A	A	E	E	T	T	H	L	Q	R	T	T	V	F	G
Template Known Secondary structure									S													T	T		.	.							S	S	S	S	S		G	G	G	G	G			S				T	T																		T	T					S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.																			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		I	D	A	E	A	R	V	V	K	S	Q	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	.	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		S	Y	D	A	N	Y	I	L	A	A	Q	R	R	T	V	H	L	D	G	P	S	G	Q	G	V	S	R	E	R	I	W	H	I	R	A	K	Q	V	V	L	A	T	A	A	H	E	R	P	I	V	F	E	N	N	D	R	P	G	I	M	L	A	G	S	V	R	S	Y	L	N	R	F	G	V	R	A	G	S	K	I
Template Known Secondary structure				T	T	T									S	T	T		S	S				T	T			S																									B	T	T	T	S	T	T																		S		S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	T	T	N	D	S	V	Y	P	L	V	S	E	L	A	A	S	G	G	V	V	A	V	I	D	A	R	Q	N	I	S	A	.	.	.	.	.	.	.	.	.	.	A	A	A	Q	A	V	T	D	G	V	T	V	L	T	G	S	V	V	A	N	T	E	A	D	A	S	G	E	L	S	A	V	L	V	A	T
Template Known Secondary structure						S	S	G	G	G								G	G	G	T			S						S	S	S				.	.	.	.	.	.	.	.	.	.								T	T					T	T										T	T	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320											.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
										222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																										.
Query SS confidence		.	.	.	.	.	.	.	.																																										.
Query Sequence		.	.	.	.	.	.	.	.	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	L	T	I	N	R	G	V	C	V	D	S	Y	L	Q	.	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A
Query Conservation		.	.	.	.	.	.	.	.																																										.
Alig confidence		.	.	.	.	.	.	.	.																																										.															.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		L	D	E	Q	R	N	L	G	E	A	Q	R	F	E	A	D	V	L	A	V	S	G	G	F	N	P	V	V	H	L	H	S	Q	R	Q	G	K	L	N	W	D	T	S	I	H	A	F	V	P	A	D	A	V	A	N	Q	H	L	A	G	A	L	T	G	.	.	.	.	.	L	L	D	T	A	S	A	L	S	T	G
Template Known Secondary structure		B		T	T			B									S																		T	T							T	T	T	T						S			T	T					G	G	G	G	T	.	.	.	.	.			S
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420						.	.	.	.	.	.	.	.	.	430	.
		293	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	L	A	K	N	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	T	G	A	A	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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