Job Description P37596 Confidence 99.82% Date Thu Jan 5 11:55:42 GMT 2012 Rank 99 Aligned Residues 276 % Identity 18% Template c1vqwB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein with similarity to flavin-containing PDBTitle: crystal structure of a protein with similarity to flavin-2 containing monooxygenases and to mammalian dimethylalanine3 monooxygenases Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	I	A	I	I	G	A	G	P	S	G	L	V	T	A	K	A	L	L	A	E	K	A	F	D	Q	V	T	L	F	E	R	R	G	S	P	G	G	V	W	N	Y	T	S	T	L	S	N	K	L	P	V	P	S	T	N	P	I	L	T	T	E	P	I	V	G	P	A	A	L	P	V	Y	P	S	P	L	Y	R
Template Known Secondary structure										S												T	T	S			S							S	S	S	S	S	S	G	G	G	S			S				S				S	S	B			T	T						B			S	S	S			B							T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
					44	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.	100
Predicted Secondary structure		.	.	.												.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	D	L	S	H	V	I	S	Q	G	Q	.	.	.	.	.	.	.	.	.	.	.	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	.	.	.	.	.	.	.	.	.	N	Q	W	Q	Y
Query Conservation		.	.	.												.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	Q	T	N	T	P	I	E	L	X	G	Y	C	D	Q	S	F	K	P	Q	T	L	Q	F	P	H	R	H	T	I	Q	E	Y	Q	R	I	Y	A	Q	P	L	L	P	F	I	K	L	A	T	D	V	L	D	I	E	K	K	D	G	S	W	V	V	T	Y	K	G	T	K	A	G	S	P	I	S	K	D	I	F
Template Known Secondary structure		T		B		S	S		T	T	T	S	S		T	T	S				T	T			S	S		B													G	G	G	G	G	G				S										T	T									S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		101	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure										.	.																.	.	.
Query SS confidence										.	.																.	.	.
Query Sequence		D	K	L	V	L	A	T	G	.	.	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	.	.	.	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S
Query Conservation										.	.																.	.	.
Alig confidence										.	.																.	.	.
Template Conservation
Template Sequence		D	A	V	S	I	C	N	G	H	Y	E	V	P	Y	I	P	N	I	K	G	L	D	E	Y	A	K	A	V	P	G	S	V	L	H	S	S	L	F	R	E	P	E	L	F	V	G	E	S	V	L	V	V	G	G	A	S	S	A	N	D	L	V	R	H	L	T	P	V	A	K	H	P	I	Y	Q	S	L	L	G	G
Template Known Secondary structure		S								S	S	S	S	B		B				B	T								S	T	T	S				G	G	G				G	G	G	G	T	T									S											T	T	T	S		S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	N	I	E	.	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	L	T	I	N	R	G
Query Conservation																																																						.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.												.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		G	D	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	S	L	Q	Q	V	P	E	I	T	K	F	D	P	T	T	R	.	.	E	I	Y	L	K	G	G	K	V	L	S	N	I	D	R	V	I	Y	C	T	G	Y	L	Y	S	V	P	F	P	S	L	A	K	L	K	S	P	E	T
Template Known Secondary structure			S		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												T	T	T	T	.	.					T	T	S							S								B											S			S	T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		247	.	.	250																		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.											.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	V	D	S	Y	L	Q	T	.	.	.	.	.	.	.	.	.	.	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N
Query Conservation											.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		K	L	I	D	D	G	S	H	V	H	N	V	Y	Q	H	I	F	Y	I	P	D	P	T	L	A	F	V	G	L	A	L	H	V	V	.	.	.	.	.	P	F	P	T	S	Q	A	Q	A	A	F	L	A	R	V	W	S	G	R
Template Known Secondary structure					S	S	S	S				S			T	T	T			T	T		T	T					S			B	S	S		.	.	.	.	.																	T	T	S
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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