Job Description P37596 Confidence 99.95% Date Thu Jan 5 11:55:42 GMT 2012 Rank 70 Aligned Residues 288 % Identity 16% Template c1fl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: catalytic core component of the alkylhydroperoxide reductase ahpf from2 e.coli Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																											.																																		.	.	.	.	.
Query SS confidence																																											.																																		.	.	.	.	.
Query Sequence		S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	.	K	P	D	L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	.	.	.	.	.
Query Conservation																																											.																																		.	.	.	.	.
Alig confidence																											.	.															.																																		.	.	.	.	.
Template Conservation																											.	.
Template Sequence		A	Y	D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	I	Y	S	A	R	K	G	I	.	.	R	T	G	L	M	G	E	R	F	G	G	Q	I	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	V	H	V	D	E	Y	D	V	D	V	I	D	S	Q	S
Template Known Secondary structure											S												T	T	T		.	.							S	S	T	T	G	G	G	G	G							B	T	T	B	S	S																T	S							S
Template Predicted Secondary structure																											.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	K	L	I	P	A	A	V	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	V	A	T	G	A	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V	E
Template Known Secondary structure									S	S	T	T								T	T	S																						T	T	T	T	T	T	B	T	T	T			S						G	G	G	G	B	T									S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	.	.	.	.	.	.	G	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		A	A	I	D	L	A	G	I	V	E	H	V	T	L	L	E	F	A	P	E	M	K	A	D	.	.	.	.	.	.	Q	V	L	Q	D	K	L	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	E	Y	R	D	R	V	S	G	D	I	H	N	I	E	L	A
Template Known Secondary structure								T	T	B	S							S	S	S	S			S		.	.	.	.	.	.									T		T	T					S	S									S	S	S	S									T	T	T									S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	.	L	T	I	N	R	G	V	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L
Query Conservation																					.
Alig confidence																					.																															.	.	.
Template Conservation																																																				.	.	.
Template Sequence		G	I	F	V	Q	I	G	L	L	P	N	T	N	W	L	E	G	A	V	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	N	V	K	G	V	F	A	A	G	D	C	T	T	V	P	.	.	.	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F
Template Known Secondary structure							S					S		G	G	G	T	T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	S		S	.	.	.	S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.				.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions