Job Description P37596 Confidence 100.00% Date Thu Jan 5 11:55:42 GMT 2012 Rank 33 Aligned Residues 363 % Identity 18% Template c1dxlC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum Resolution 3.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																																					.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	P	D
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		E	N	D	V	V	I	I	G	G	G	P	G	G	Y	V	A	A	I	K	A	A	Q	L	G	F	.	.	K	T	T	C	I	E	K	R	G	A	L	G	G	T	C	L	N	V	G	C	I	P	S	K	A	L	L	H	S	S	H	M	Y	H	E	A	K	H	S	F	A	N	H	G	V	K	V	S	N	V	E	I	D
Template Known Secondary structure		B		S							S														T		.	.								S	S	S	S	S							S																				T									S
Template Predicted Secondary structure																											.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		L	S	H	V	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	.	.	Q	N	N	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P	V	P	G	R	E	L	M	L
Query Conservation																																																		.	.
Alig confidence																																																		.	.
Template Conservation
Template Sequence		L	A	A	M	M	G	Q	K	D	K	A	V	S	N	L	T	R	G	I	E	G	L	F	K	K	N	K	V	T	Y	V	K	G	Y	G	K	F	V	S	P	S	E	I	S	V	D	T	I	E	G	E	N	T	V	V	K	G	K	H	I	I	I	A	T	G	S	D	V	K	S	L	P	G	V	T	I	D	E	K	K
Template Known Secondary structure																												T						S					S	S	S	S						B	T	T	T	B							S														S	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	P	P	E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K
Query Conservation
Alig confidence								.	.	.	.																																														.
Template Conservation								.	.	.	.																																														.
Template Sequence		I	V	S	S	T	G	.	.	.	.	A	L	A	L	S	E	I	P	K	K	L	V	V	I	G	A	G	Y	I	G	L	E	M	G	S	V	W	G	R	I	G	S	E	V	T	V	V	E	F	A	S	E	I	V	P	.	T	M	D	A	E	I	R	K	Q	F	Q	R	S	L	E	K	Q	G	M	K	F	K	L	K
Template Known Secondary structure								.	.	.	.			T		S	S			S					S	S		S														T								S	S	S	S	S	S	S	.	S	S														T	T	S					T	T
Template Predicted Secondary structure								.	.	.	.																																														.
Template SS confidence
		164	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																			.	.	.	.
Query SS confidence														.	.	.	.	.																																			.	.	.	.
Query Sequence		S	Q	L	Q	G	L	E	K	T	D	S	G	.	.	.	.	.	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	L	.	.	.	.	T	I	N	R	G	V	C	V	D	S	Y	L	Q	T	S	N	T	D	I	Y	A	L	G	D	C
Query Conservation														.	.	.	.	.																																			.	.	.	.
Alig confidence														.	.	.	.	.																																			.	.	.	.
Template Conservation
Template Sequence		T	K	V	V	G	V	D	T	S	G	D	G	V	K	L	T	V	E	P	S	A	G	G	E	Q	T	I	I	E	A	D	V	V	L	V	S	A	G	R	T	P	F	T	S	G	L	N	L	D	K	I	G	V	E	T	D	K	L	G	R	I	L	V	N	E	R	F	S	T	N	V	S	G	V	Y	A	I	G	D	V
Template Known Secondary structure								B		S	S	S	S		B			B			S	S	S	S			B					S													T	T				T	T	T						T	T	S						T	T	S	B		S	S	T	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.																		.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	N	G	Q	V	L	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L	G	N	N	T	P	L	K	L	P	A	M	L	V	K	I	K	T	P	E	L	P	L	H	L	A	G	E	T	Q	R	Q	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	W	Q	I
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.																																			.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.																																			.
Template Sequence		I	P	G	.	.	.	.	P	M	L	A	H	K	A	E	E	D	G	V	A	C	V	E	Y	L	A	G	K	V	G	H	V	D	Y	D	K	V	P	G	V	V	.	Y	T	N	P	E	V	A	S	V	G	K	T	E	E	Q	V	K	E	T	G	V	E	Y	R	V	G	K	F	P	F	M	A	N	S	R	A	K	A
Template Known Secondary structure		S	S	S	.	.	.	.																				T	S						T	T	S						.		S	S	S															T	T										G	G	G
Template Predicted Secondary structure					.	.	.	.																																			.
Template SS confidence
		319	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	T	E	R	Q	G	M	V	A	R	G	V	D	D	A	.	D	Q	L	R	A	F	V	V	S	E	D	R	M	K	E	A	F	G	L	L	K	T	L	P	M
Query Conservation																	.
Alig confidence																	.																					.
Template Conservation																																						.
Template Sequence		I	D	N	A	E	G	L	V	K	I	I	A	E	K	E	T	D	K	I	L	G	V	H	I	M	A	P	N	A	G	E	L	I	H	E	A	.	A	I	A	L
Template Known Secondary structure			T												T	T	T		B									T	T									.
Template Predicted Secondary structure																																						.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.