Job Description P37596 Confidence 99.66% Date Thu Jan 5 11:55:42 GMT 2012 Rank 112 Aligned Residues 288 % Identity 16% Template c1chuA_ PDB info PDB header:flavoenzyme Chain: A: PDB Molecule:protein (l-aspartate oxidase); PDBTitle: structure of l-aspartate oxidase: implications for the2 succinate dehydrogenase/ fumarate reducatse family Resolution 2.20 Å

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		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.								50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																																															.	.	.	.	.	.	.																					.	.
Query SS confidence					.	.																																															.	.	.	.	.	.	.																					.	.
Query Sequence		M	S	N	.	.	G	I	V	I	I	G	S	G	F	A	A	R	Q	L	V	K	N	I	R	K	Q	D	A	T	I	P	L	T	L	I	A	A	D	S	M	D	E	Y	N	K	P	D	L	S	H	V	.	.	.	.	.	.	.	I	S	Q	G	Q	R	A	D	D	L	T	R	Q	T	A	G	E	F	A	E	.	.
Query Conservation					.	.																																															.	.	.	.	.	.	.																					.	.
Alig confidence					.	.																							.	.	.																						.	.	.	.	.	.	.																					.	.
Template Conservation																													.	.	.
Template Sequence		P	E	H	S	C	D	V	L	I	I	G	S	G	A	A	G	L	S	L	A	L	R	L	A	D	Q	H	.	.	.	Q	V	I	V	L	S	K	G	P	V	T	E	F	D	E	T	D	S	I	D	S	H	V	E	D	T	L	I	A	G	A	G	I	C	D	R	H	A	V	E	F	V	A	S	N	A	R	S	C	V
Template Known Secondary structure			S				S							S											T	T	T	S	.	.	.							S	S		T	T				S															T	T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	N	L	H	L	F	P	Q	T	W	V	T	D	I	D	A	E	A	R	V	V	K	S	Q	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	Q	Y	D	K	L	V	L	A	T	G	A	S	A	F	V	P	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	W	L	I	D	Q	G	V	L	T	T	L	V	S	K	A	L	N	H	P	N	I	R	V	L	E	R	T	N	A	V	D	L	I	V	S	D	K	I	G	L	P	G	T	R	R	V	V	G	A	W	V	W	N	R	N	K	E	T	V	E	T	C	H	A	K	A	V	V	L	A	T	G	G	A	S	K	V	Y	Q
Template Known Secondary structure							T	T													T	T						S									G	G	G	T	T			S	S		B									T	T	T	T								S										G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.
Predicted Secondary structure																															.	.	.	.	.																																						.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.																																						.	.	.	.	.	.	.
Query Sequence		V	P	G	R	E	L	M	L	T	L	N	S	Q	Q	E	Y	R	A	C	E	T	Q	L	R	D	A	R	R	V	.	.	.	.	.	L	I	V	G	G	G	L	I	G	S	E	L	A	M	D	F	C	R	A	G	K	A	V	T	L	I	D	N	A	A	S	I	L	A	S	L	M	.	.	.	.	.	.	.	P	P
Query Conservation																															.	.	.	.	.																																						.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	T	N	P	D	I	S	S	G	D	G	I	A	M	A	W	R	A	G	C	R	V	A	N	L	E	F	N	Q	F	H	P	T	A	L	Y	H	P	Q	A	R	N	F	L	L	T	E	A	L	R	G	E	G	A	Y	L	K	R	P	D	G	T	R	F	M	P	D	F	D	E	R	G	E	L	A	P	R	D	I
Template Known Secondary structure		S	B	S		G	G	G		S										T	T						T	T											S	T	T		T	T		B								T	T						T	T	S		B		G	G	G	T		T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		E	V	S	S	R	L	Q	H	R	L	T	E	M	G	V	H	L	L	L	K	S	Q	L	Q	G	L	E	K	T	D	S	G	I	Q	A	T	L	D	R	Q	R	N	I	E	V	D	A	V	I	A	A	T	G	L	R	P	E	T	A	L	A	R	R	A	G	.	.	L	T	I	N	R	G	V	C	V	D	S	Y	L
Query Conservation																																																																			.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation																					.	.	.	.	.	.	.	.	.
Template Sequence		V	A	R	A	I	D	H	E	M	K	R	L	G	A	D	C	M	F	L	.	.	.	.	.	.	.	.	.	D	I	S	H	K	P	A	D	F	I	R	Q	H	F	P	M	I	Y	E	K	L	L	G	L	G	I	D	L	T	Q	E	P	V	P	I	V	P	A	A	H	Y	T	C	G	G	V	M	V	D	D	H	G
Template Known Secondary structure														T		S					.	.	.	.	.	.	.	.	.				S	S		S																T	T	T			T	T	T	S												S							T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.										.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		Q	T	S	N	T	D	I	Y	A	L	G	D	C	A	E	I	N	G	Q	V	L	.	.	.	.	.	P	F	L	Q	P	I	Q	L	S	A	M	V	L	A	K	N	L	L
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		R	T	D	V	E	G	L	Y	A	I	G	E	V	S	Y	T	G	L	H	G	A	N	R	M	A	S	N	S	L	L	E	C	L	V	Y	G	W	S	A	A	E	D	I	T
Template Known Secondary structure		B		S	S	B	T					G	G	G				S	S	S	T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions