Job Description P45424 Confidence 31.24% Date Wed Jan 25 15:20:54 GMT 2012 Rank 13 Aligned Residues 62 % Identity 27% Template c3d82A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	D	N	I	F	M	N	V	M	T	F	N	T	Q	S	P	V	E	K	K	A	E	L	H	E	Q	Y	I	D	I	Q	L	L	L	N	G	E	E	R	I	L	F	G	M	A	G	T	A	R	Q	C	E	E	F	H	H	E	D	D	Y	Q	L	C	S	T	I	D	N	E	Q	A	I	I	L	K	P	G	M	F
Query Conservation
Alig confidence															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	N	D	Y	Q	F	K	L	V	K	V	E	.	.	.	.	G	E	F	V	W	H	E	H	A	D	T	D	E	V	F	I	V	X	E	G	T	L	Q	I	A	F	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	I	T	L	Q	A	G	E	X
Template Known Secondary structure				T	T										.	.	.	.						B			T	T										S							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure															.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																										.	.	.	70	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	F	M	P	G	E	P	H	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	I	P	K	G	V	E	H	K	P
Template Known Secondary structure						T	T			B
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions