Return to main results Retrieve Phyre Job Id

Job DescriptionP45424
Confidence22.59%DateWed Jan 25 15:20:54 GMT 2012
Rank18Aligned Residues83
% Identity12%Templatec2gu9B_
PDB info PDB header:immune systemChain: B: PDB Molecule:tetracenomycin polyketide synthesis protein; PDBTitle: crystal structure of xc5357 from xanthomonas campestris: a2 putative tetracenomycin polyketide synthesis protein3 adopting a novel cupin subfamily structure
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  RYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILK
Query Conservation 
  
 

 

  
    
        
 

 




  
 
 
 
             
    
  
         
 
 
Alig confidence 
















































.........................





Template Conservation    
       
    
 

       
 
    
   

 
     
  .........................    
 
Template Sequence  KVLFSLRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVDG. . . . . . . . . . . . . . . . . . . . . . . . . HTQALQ
Template Known Secondary structure  TT
TT




SSS




TT.........................
Template Predicted Secondary structure 

























.........................
Template SS confidence 















































































   13......20.........30.........40.........50.........60. ......
 
   117..120.........130.........140......
Predicted Secondary structure 
















Query SS confidence 





























Query Sequence  PGMFAVFMPGEPHKPGCVVGEPGEIKKVVV
Query Conservation   
 
 



 
 
 
         


 
 
Alig confidence 













..













Template Conservation   

 
 

    
 ..  
 
      
 
Template Sequence  AGSLIAIERGQAHE. . IRNTGDTPLKTVNF
Template Known Secondary structure  TT

SS

..
SSS
Template Predicted Secondary structure 





..




Template SS confidence 





























   68.70.........80. ........90.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions