Job Description P68767 Confidence 36.28% Date Thu Jan 5 12:11:12 GMT 2012 Rank 79 Aligned Residues 126 % Identity 10% Template c3tx8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of a succinyl-diaminopimelate desuccinylase (arge)2 from corynebacterium glutamicum atcc 13032 at 2.97 a resolution Resolution 2.97 Å

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		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	A	K	D	L	G	N	M	P	P	N	I	C	N	A	A	Y	L	A	S	Q	A	R	Q	L	A	D	S	Y	S	K	N	V	I	T	R	V	I	G	E	Q	Q	M	K	E	L	G	M	H	S	Y	L	A	V	G	Q	G	S	Q	N	E	S	L	M	S	V	I	E	Y	K	G	N	A	S	E	D	A	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		I	V	L	T	Q	R	L	V	D	I	P	S	P	S	G	Q	E	K	Q	I	A	D	E	I	E	D	A	L	R	N	L	N	L	P	G	V	E	V	F	.	.	.	.	.	.	.	.	.	R	F	N	N	N	V	L	A	R	T	N	R	G	L	A	S	R	V	X	L	A	G	H	I	D	T	V	P	I	A	D	N
Template Known Secondary structure										S	S			B	T	T		T													T	T	T		T	T					.	.	.	.	.	.	.	.	.			T	T											S											B	S				S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	I	V	L	V	G	K	G	L	T	F	D	S	G	G	I	S	I	K	P	S	E	G	M	D	E	M	K	Y	D	M	C	G	A	A	A	V	Y	G	V	M	R	M	V	A	E	L	Q	L	P	.	I	N	V	I	G	V	L	A	G	C	E	N	M	P	G	G	R
Query Conservation																																																				.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	S	R	V	E	D	G	I	X	Y	G	C	G	T	V	.	.	.	.	.	.	.	.	.	.	.	.	D	X	K	S	G	L	A	V	Y	L	H	T	F	A	T	L	A	T	S	T	E	L	K	H	D	L	T	L	I	A	Y	E	C	E	E	V	A	D	H	L
Template Known Secondary structure			S					S	S				S	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T															T	S		T	T			S											S	S		T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.													.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions