Job Description P68767 Confidence 91.05% Date Thu Jan 5 12:11:12 GMT 2012 Rank 21 Aligned Residues 129 % Identity 12% Template c3t6mA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:succinyl-diaminopimelate desuccinylase; PDBTitle: crystal structure of the catalytic domain of dape protein from2 v.cholerea in the zn bound form Resolution 1.65 Å

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		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	I	K	A	A	K	D	L	G	N	M	P	P	N	I	C	N	A	A	Y	L	A	S	Q	A	R	Q	L	A	D	S	Y	S	K	N	V	I	T	R	V	I	G	E	Q	Q	M	K	E	L	G	M	H	S	Y	L	A	V	G	Q	G	S	Q	N	E	S	L	M	S	V	I	E	Y	K	G	N	A	S	E
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.									.
Template Conservation																																														.	.	.	.	.	.	.									.
Template Sequence		S	P	V	L	A	L	A	K	E	L	I	S	R	Q	S	V	T	P	A	D	A	G	C	Q	D	L	M	I	E	R	L	K	A	L	G	F	E	I	E	S	M	V	F	E	.	.	.	.	.	.	.	D	T	T	N	F	W	A	R	.	R	G	T	Q	S	P	L	F	V	F	A	G	H	T	D	V	V	P	A	G
Template Known Secondary structure													T	S			B	T	T			T	T											T	T	T									T	.	.	.	.	.	.	.	T								.			S	S	S											B
Template Predicted Secondary structure																																														.	.	.	.	.	.	.									.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.			.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																				.																		.	.
Query SS confidence																																				.																		.	.
Query Sequence		D	A	R	P	I	V	L	V	G	K	G	L	T	F	D	S	G	G	I	S	I	K	P	S	E	G	M	D	E	M	K	Y	D	M	.	C	G	A	A	A	V	Y	G	V	M	R	M	V	A	E	L	Q	.	.	L	P	I	N	V	I	G	V	L	A	G	C	E
Query Conservation																																				.																		.	.
Alig confidence				.	.	.	.	.	.	.																										.																		.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		P	L	.	.	.	.	.	.	.	S	Q	W	H	T	P	P	F	E	P	T	V	I	D	G	F	L	H	G	R	G	A	A	D	M	K	G	S	L	A	C	M	I	V	A	V	E	R	F	I	A	E	H	P	D	H	Q	G	S	I	G	F	L	I	T	S	D	E
Template Known Secondary structure			G	.	.	.	.	.	.	.	G	G		S	S		T	T	S					T	T				S	T	T	T	T	T	T																			T	T		S	S								S		T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		76	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions