|   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | I | K | A | A | K | D | L | G | N | M | P | P | N | I | C | N | A | A | Y | L | A | S | Q | A | R | Q | L | A | D | S | Y | S | K | N | V | I | T | R | V | I | G | E | Q | Q | M | K | E | L | G | M | H | S | Y | L | A | V | G | Q | G | S | Q | N | E | S | L | M | S | V | I | E | Y | K | G | N | A | S | E | D |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |
|   |
|
|   |
|   |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|   |   |   |
Template Sequence |   |
R | L | L | N | T | F | L | E | L | V | Q | I | D | S | E | T | G | N | E | S | T | I | Q | P | I | L | K | E | K | F | I | A | L | G | . |
. |
L | D | V | K | E | D | E | A | A | K | H | P | K | L | G | A | N | N | L | V | C | T | X | N | S | T | I | E | V | P | K | L | Y | L | T | S | H | X | D | T | V | V | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | S |
|
| B | T | T |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|  |  |  |  |
| S | G | G | G | S | T | T |
| S | S |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| B |
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
262 | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
. | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | P | I | V | L | V | G | K | G | L | T | F | D | S | G | G | I | S | I | K | P | S | E | G | M | D | E | M | K | Y | D | M | C | . |
G | A | A | A | V | Y | G | V | M | R | M | V | A | E | L | Q | L | P | . |
I | N | V | I | G | V | L | A | G | C | E | N | M | P | G |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|   | . |
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|   |   |   | . |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
Template Sequence |   |
I | N | V | K | P | I | V | K | D | D | G | Y | I | Y | . |
. |
. |
. |
. |
. |
. |
. |
S | D | G | T | T | I | L | G | A | D | D | K | A | G | L | A | A | X | L | E | V | L | Q | V | I | K | E | Q | Q | I | P | H | G | Q | I | Q | F | V | I | T | V | G | E | E | S | G | L |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |
| T | T | S |  |  |  | . | . | . | . | . | . | . | . |
|
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  | S |
| G | G | G | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |