Return to main results Retrieve Phyre Job Id

Job DescriptionP68767
Confidence69.31%DateThu Jan 5 12:11:12 GMT 2012
Rank42Aligned Residues113
% Identity16%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   184.....190.........200.........210.........220.........230.........240.........250.........260...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  IKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDAR
Query Conservation     



 
 
 
   
   
  
          
 
 
 
   
   


  



 

   
 

 
 
 
       
Alig confidence 




































.......................



















Template Conservation        
  


 
  
      
   
   
  
  .......................
   

 
            
Template Sequence  WQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRR. . . . . . . . . . . . . . . . . . . . . . . DPTGNVFIKKPATPGMENKK
Template Known Secondary structure  TTS

BTT

TTTT

.......................
TTS



SS

SB
Template Predicted Secondary structure 









.......................













Template SS confidence 















































































   17..20.........30.........40.........50... ......60.........70...
 
   264.....270......... 280... ......290.........300.........310.........
Predicted Secondary structure 






.



................






Query SS confidence 















.



. . . . . . . . . . . . . . . .



































Query Sequence  PIVLVGKGLTFDSGGI. SIKP. . . . . . . . . . . . . . . . SEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGV
Query Conservation   
 











 .



................   
  

 

 






   
 
 
    

   
Alig confidence 















.



................



































Template Conservation   


  
 



         
  


     

 
 


  
  
 
  


 
            
  
  
Template Sequence  GVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLT
Template Known Secondary structure 


B


B
SS



TTTS


TTSSB


T
SS


S
Template Predicted Secondary structure 




































Template SS confidence 








































































   74.....80.........90.........100.........110.........120.........130.........140......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions