Job Description P68767 Confidence 100.00% Date Thu Jan 5 12:11:12 GMT 2012 Rank 4 Aligned Residues 485 % Identity 29% Template c3kzwD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cytosol aminopeptidase; PDBTitle: crystal structure of cytosol aminopeptidase from staphylococcus aureus2 col Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	F	S	V	K	S	G	S	P	E	K	Q	R	S	A	C	I	V	V	G	V	F	E	P	R	R	L	S	P	I	A	E	Q	L	D	K	I	S	D	G	Y	I	S	A	L	L	R	R	G	E	L	E	G	K	P	G	Q	T	L	L	L	H	H	V	P	N	V	L	S	E	R	I	L	L	I	G	C	G	K
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		M	N	F	K	L	.	.	N	N	T	L	S	N	E	I	N	T	L	I	I	G	I	P	E	H	L	N	Q	L	E	R	I	S	F	N	H	I	D	I	T	E	S	L	E	R	L	K	H	Q	H	I	I	G	S	K	V	G	K	I	Y	T	T	A	F	D	V	Q	D	Q	T	Y	R	L	I	T	V	G	L	G	N
Template Known Secondary structure							.	.						S	S										S		G	G	G	S						T	T													T	T	S	S			S	B	T										T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		1	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	E	L	D	E	R	Q	Y	K	Q	V	I	Q	K	T	I	N	T	L	N	D	T	G	S	M	E	A	V	C	F	L	T	E	L	H	V	K	G	R	N	N	Y	W	K	V	R	Q	A	V	E	T	A	K	E	T	L	Y	S	F	D	Q	L	K	T	N	K	S	E	P	R	R	P	L	R	K	M	V	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	T	R	S	Y	Q	D	M	L	K	I	W	G	H	L	F	Q	Y	I	K	S	E	H	I	E	D	T	Y	L	L	M	D	S	F	I	S	K	Y	D	Q	L	S	D	V	L	M	A	C	G	I	Q	S	E	R	A	T	Y	E	F	D	H	Y	K	S	S	K	K	A	P	F	K	T	N	L	N	L	I	S	E
Template Known Secondary structure		S	T	T																				T	T								G	G	G	T			S	S	S																T	T					T	T		T	T														S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	T	R	R	E	L	T	S	G	E	R	A	I	Q	H	G	L	A	I	A	A	G	I	K	A	A	K	D	L	G	N	M	P	P	N	I	C	N	A	A	Y	L	A	S	Q	A	R	Q	L	A	D	S	Y	S	K	N	V	I	T	R	V	I	G	E	Q	Q	M	K	E	L	G	M	H	S	Y	L	A	V	G
Query Conservation
Alig confidence						.	.	.	.	.	.																																														.	.
Template Conservation						.	.	.	.	.	.																																														.	.
Template Sequence		S	L	I	E	.	.	.	.	.	.	L	D	F	I	H	E	G	I	S	I	G	Q	S	I	N	L	A	R	D	F	S	N	M	P	P	N	V	L	T	P	Q	T	F	A	E	D	I	V	N	H	F	K	N	T	K	.	.	V	K	V	D	V	K	D	Y	D	T	L	V	S	E	G	F	G	L	L	Q	A	V	G
Template Known Secondary structure		S				.	.	.	.	.	.																							S		T	T	T	S													S	T	T	S	S	.	.														T	T
Template Predicted Secondary structure						.	.	.	.	.	.																																														.	.
Template SS confidence
		159	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	S	Q	N	E	S	L	M	S	V	I	E	Y	K	G	N	A	S	E	D	A	R	P	I	V	L	V	G	K	G	L	T	F	D	S	G	G	I	S	I	K	P	S	E	G	M	D	E	M	K	Y	D	M	C	G	A	A	A	V	Y	G	V	M	R	M	V	A	E	L	Q	L	P	I	N	V	I	G	V	L
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		K	G	S	K	H	K	P	R	L	V	T	I	T	Y	N	G	K	D	K	D	E	.	A	P	I	A	L	V	G	K	G	I	T	Y	D	S	G	G	Y	S	I	K	T	K	N	G	M	A	T	M	K	F	D	M	C	G	A	A	N	V	V	G	I	I	E	A	A	S	R	L	Q	L	P	V	N	I	V	G	V	L
Template Known Secondary structure		T	T	S	S	S											S	S		S	S	S	.																T	T	S								T	T	G	G	G	G	G																T	T		S
Template Predicted Secondary structure																							.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	G	C	E	N	M	P	G	G	R	A	Y	R	P	G	D	V	L	T	T	M	S	G	Q	T	V	E	V	L	N	T	D	A	E	G	R	L	V	L	C	D	V	L	T	Y	V	E	R	F	E	P	E	A	V	I	D	V	A	T	L	T	G	A	C	V	I	A	L	G	H	H	I	T	G	L	M	.	A	N	H
Query Conservation																																																																														.
Alig confidence																																																																														.
Template Conservation
Template Sequence		A	C	A	E	N	M	I	N	E	A	S	M	K	P	D	D	V	F	T	A	L	S	G	E	T	V	E	V	M	N	T	D	A	E	G	R	L	V	L	A	D	A	V	F	Y	A	N	Q	Y	Q	P	S	V	I	M	D	F	A	T	L	T	G	A	A	I	V	A	L	G	D	D	K	A	A	A	F	E	S	N	S
Template Known Secondary structure										T	T				T	T						T	T	S						S		T	T																T	T			S																		T	T								S
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																																															.
Query SS confidence																																		.																																															.
Query Sequence		N	P	L	A	H	E	L	I	A	A	S	E	Q	S	G	D	R	A	W	R	L	P	L	G	D	E	Y	Q	E	Q	L	E	.	S	N	F	A	D	M	A	N	I	G	G	R	P	G	G	A	I	T	A	G	C	F	L	S	R	F	T	R	K	Y	N	W	A	H	L	D	I	A	G	T	A	W	R	S	G	K	.
Query Conservation																																		.																																															.
Alig confidence																																		.																																															.
Template Conservation
Template Sequence		K	V	I	L	N	D	I	L	Q	I	S	S	E	V	D	E	M	V	F	E	L	P	I	T	A	T	E	R	A	S	I	K	H	S	D	I	A	D	L	V	N	H	T	N	G	Q	G	K	A	L	F	A	A	S	F	V	T	H	F	S	G	Q	T	P	H	I	H	F	D	I	A	G	P	A	T	T	N	K	A	S
Template Known Secondary structure															T	T																T	T			S	S	S	S			S			S	S	S												G	G	G	T	T	S								T	T	T	T			S	S		B
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
					478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	K	G	A	T	G	R	P	V	A	L	L	A	Q	F	L	L	N	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		Y	N	G	P	K	G	P	T	G	F	M	I	P	T	I	V	Q	W	L	K	Q	Q
Template Known Secondary structure		T	T	B	S	S					T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.