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Job DescriptionP68767
Confidence93.19%DateThu Jan 5 12:11:12 GMT 2012
Rank17Aligned Residues133
% Identity10%Templatec3ct9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:acetylornithine deacetylase; PDBTitle: crystal structure of a putative zinc peptidase (np_812461.1) from2 bacteroides thetaiotaomicron vpi-5482 at 2.31 a resolution
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  LAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGN
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Template Sequence  TXTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGXQTG. . . . . . . . . . . . RKGNNVWCLSPXFDKPTILLNSHIDT
Template Known Secondary structure  S

BTT

TTT


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B
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   7..10.........20.........30.........40........ .50.........60.........70....
 
   258.260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  ASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYR
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Template Sequence  VKPVKDPFTPREENGKLYGLGSN. . . . . . . . . . . DAGASVVSLLQVFLQLCRTSQNYNLIYLASCEEEVSGKEGIE
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TTSGG
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   77..80.........90......... 100.........110.........120.........130.........140.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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