Job Description P68767 Confidence 70.85% Date Thu Jan 5 12:11:12 GMT 2012 Rank 39 Aligned Residues 166 % Identity 10% Template c2xd7B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:core histone macro-h2a.2; PDBTitle: crystal structure of the macro domain of human core histone2 h2a Resolution 2.09 Å

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		1	.	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.	.	.																		.																			.	.	.
Query SS confidence														.	.	.																		.																			.	.	.
Query Sequence		M	E	F	S	V	K	S	G	S	P	E	K	.	.	.	Q	R	S	A	C	I	V	V	G	V	F	E	P	R	R	L	S	.	P	I	A	E	Q	L	D	K	I	S	D	G	Y	I	S	A	L	L	.	.	.	R	R	G	E	L	E	G	K	P	G	Q	T	L	L	L	H	H	V	P	N	V	L	S	E	R	I
Query Conservation														.	.	.																		.																			.	.	.
Alig confidence														.	.	.																		.																			.	.	.																		.
Template Conservation																																																																									.
Template Sequence		Q	K	L	S	L	T	Q	S	D	I	S	H	I	G	S	M	R	V	E	G	I	V	H	P	T	T	A	E	I	D	L	K	E	D	I	G	K	A	L	E	K	A	G	G	K	E	F	L	E	T	V	K	E	L	R	K	S	Q	G	P	L	E	V	A	E	A	A	V	S	Q	S	.	S	G	L	A	A	K	F	V
Template Known Secondary structure											G	G	G	G	G	G				S								T	T					S																									T		S			T	T								.	T	T	S	S	S	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.
		74	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	L	I	G	C	G	.	K	E	R	E	L	D	E	R	Q	Y	K	Q	V	I	Q	K	T	I	N	T	L	N	D	T	G	S	M	E	A	V	C	F	L	T	E	L	H	V	K	G	R	N	N	Y	W	K	V	R	Q	A	V	E	T	A	K	E	T	L	Y	S	F	D	Q	L	K	T	N	K	S	E	P	R	R
Query Conservation								.
Alig confidence								.																																																																		.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		I	H	C	H	I	P	Q	W	G	S	D	K	C	E	E	Q	L	E	E	T	I	K	N	C	L	S	A	A	E	D	K	K	L	K	S	V	A	F	P	P	F	P	S	G	R	N	C	F	P	K	Q	T	A	A	Q	V	T	L	K	A	I	S	A	H	F	D	D	S	S	A	S	S	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	T	T																			T	T		S										S	S	S																							S	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	R	K	M	V	F	N	V	P	T	R	R	E	L	T	S	G	E	R	A	I	Q	H
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	L	K	N	V	Y	F	L	L	F	D	S	E	S	I	G	I	Y	V	Q	E	M	A	K
Template Known Secondary structure		.										S
Template Predicted Secondary structure		.
Template SS confidence
			346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions