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33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
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. | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
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| . | . | . | . | . |
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|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
C | E | V | N | I | N | D | Q | N | V | I | T | N | A | V | S | C | G | T | . |
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. |
M | F | R | G | L | E | I | I | L | Q | G | R | D | P | R | D | A | W | A | F | V | E | R | I | C | G | V | C | T | G | V | H | . |
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A | L | A | S | V | Y | A | I | E | D | A |
Query Conservation |   |
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|   |   |   |   |   | . | . | . | . | . |   |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
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|   | . |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
V | I | I | K | D | N | S | . |
G | H | T | G | V | G | E | I | P | G | G | E | K | I | R | K | T | L | E | D | A | I | P | L | V | V | G | K | T | L | G | E | Y | K | N | V | L | T | L | V | R | N | T | F | A | D | R | D | A | G | G | R | G | L | Q | T | F | D | L | R | T | T | I | H | V | V | T | G | I | E | A | A |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | . | S |
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| B | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G | G | T | T |
| S |
| S | S | S | S |
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|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
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| . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
41 | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
  |   |
95 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
I |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
M |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
120 |
  |