 |
Job Description | P0ACD8 | Confidence | 23.44% | Date | Thu Jan 5 11:17:58 GMT 2012 |
Rank | 38 | Aligned Residues | 47 |
% Identity | 26% | Template | d1hcza2 |
SCOP info | Barrel-sandwich hybrid
| Rudiment single hybrid motif
| Cytochrome f, small domain
|
Resolution | 1.96 |
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | N | N | A | G | R | R | L | V | V | D | P | I | T | R | I | E | . |
G | H | M | R | C | E | V | N | I | N | D | Q | N | V | I | T | N | A | V | S | C | G | T | M | F | R | G | L | E | I | I | L | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
| . |
|
|
|   |
|   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|   |
|
|   |
|   |   |   |
|
|
|   |   |   |
|
|
| . |
|   |
|
|   |   |   |   | . | . | . |   |   |   |   |
|   |   |
|
|   |
|
|
|   |
Template Sequence |   |
T | V | Y | N | A | T | A | G | G | I | I | S | K | I | L | R | K | E | K | G | G | Y | E | I | T | I | . |
V | D | A | S | N | E | R | Q | . |
. |
. |
V | I | D | I | I | P | R | G | L | E | L | L | V | S |
Template Known Secondary structure |   |
|
|
| B |
| S | S |
|  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | . |  |  | T | T | T | T |  |  | . | . | . |  |  |  |  |  |
| T | T |
|
| B |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
. | . | . | . | . | 200 | . | . | |
|
|
. | . | . | . | . | . | . | 210 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|