Job Description P0ACD8 Confidence 12.53% Date Thu Jan 5 11:17:58 GMT 2012 Rank 71 Aligned Residues 85 % Identity 20% Template c2v3jA_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:essential for mitotic growth 1; PDBTitle: the yeast ribosome synthesis factor emg1 alpha beta knot2 fold methyltransferase Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.															.	.	.	.	50	.	.	.	.	.										.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		M	S	T	Q	Y	E	T	Q	G	Y	T	I	N	N	A	G	R	R	L	V	V	D	P	I	T	R	I	E	G	H	M	R	C	E	V	N	I	N	D	Q	N	V	I	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	S	C	G	T	M	F	R	G	.	.	.	.	.	.	.	.	.	L	E
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	V	Q	L	L	H	K	L	S	I	R	S	E	E	K	L	L	K	V	I	K	N	P	I	T	D	H	L	P	T	K	C	R	K	V	T	L	S	F	D	A	P	V	I	R	V	Q	D	Y	I	E	K	L	D	D	D	E	S	I	C	V	F	V	G	A	X	A	R	G	K	D	N	F	A	D	E	Y	V	D	E
Template Known Secondary structure									S														S		G	G	G	T	S		S	S								T	T	S		B									T	S		T	T										S	S	S			T	T	T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	Q	G	R	D	P	R	D	A	W	A	F	V	E	R	I	C	G	V	C	T	G	V	H	A	L	A	S	V	Y	A	I	E	D	A	I	G	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	L	S	N	Y	P	L	S	A	S	V	A	C	S	K	F	C	H	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	D	A	W	N	I
Template Known Secondary structure				B	S		S	S														.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions