Job Description P38489 Confidence 100.00% Date Thu Jan 5 11:58:09 GMT 2012 Rank 19 Aligned Residues 177 % Identity 19% Template c3gh8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:iodotyrosine dehalogenase 1; PDBTitle: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound2 to fmn and di-iodotyrosine (dit) Resolution 2.61 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	I	I	S	V	A	L	K	R	H	S	T	K	A	F	D	A	S	K	K	L	T	P	E	Q	A	E	Q	I	K	T	L	L	Q	Y	S	P	S	S	T	N	S	Q	P	W	H	F	I	V	A	S	T	E	E	G	K	A	R	V	A	K	S	A	A	G	N	Y	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		Q	E	F	Y	E	L	L	N	K	R	R	S	V	R	F	I	.	S	S	E	H	V	P	M	E	V	I	E	N	V	I	K	A	A	G	T	A	P	S	G	A	H	T	E	P	W	T	F	V	V	V	K	D	P	D	M	K	H	K	I	R	E	I	I	E	E	E	E	E	I	N	Y	M	K	R	M	G	K	R	W
Template Known Secondary structure									T	T					S		B	.																		T	T	S			G	G	G																																T	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
											69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	F	N	E	R	K	M	L	D	A	S	H	V	V	V	F	C	A	K	T	A	M	D	D	V	W	L	K	L	V	V	D	Q	E	D	A	D	G	R	F	A	T	P	E	A	K	A	A	N	D	K	G	R	K	F	F	A	D	M	H	R	K	D	L	H	D	D	A	E	W	M
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	D	L	K	K	L	R	T	N	W	I	K	E	Y	L	D	T	A	P	V	L	I	L	I	F	K	Q	V	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	A	N	G	K	K	K	V	H	Y	Y	N
Template Known Secondary structure						G	G	G				S			T					S	S									S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.																																					.	.	.	200	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		A	K	Q	V	Y	L	N	V	G	N	F	L	L	G	V	A	A	L	G	L	D	A	V	P	I	E	G	F	D	.	A	A	I	L	D	A	E	F	G	L	K	E	K	G	Y	T	S	L	V	V	V	P	V	G	H	H	S	V	E	D	F	N	A	T	L	P	K	S	R	L	P	Q	N	I	T	L	T	E	V
Query Conservation																															.
Alig confidence																															.														.																				.	.
Template Conservation																																													.																				.	.
Template Sequence		E	I	S	V	S	I	A	C	G	L	L	L	A	A	L	Q	N	A	G	L	V	T	V	T	T	T	P	L	N	C	G	P	R	L	R	V	L	L	G	R	P	S	H	.	E	K	L	L	V	L	L	P	V	G	Y	P	S	R	D	A	T	V	P	.	.	D	L	K	R	K	A	L	D	Q	I	M	V	T	V
Template Known Secondary structure																			T	T		B				B			T	T									T	T			T	T	.										B		B		T	T					.	.							G	G	G	T
Template Predicted Secondary structure																																													.																				.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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