Job Description P38489 Confidence 100.00% Date Thu Jan 5 11:58:09 GMT 2012 Rank 24 Aligned Residues 188 % Identity 18% Template c3eo8A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:blub-like flavoprotein; PDBTitle: crystal structure of blub-like flavoprotein (yp_001089088.1) from2 clostridium difficile 630 at 1.74 a resolution Resolution 1.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	I	S	V	A	L	K	R	H	S	T	K	A	F	D	A	S	K	K	L	T	P	E	Q	A	E	Q	I	K	T	L	L	Q	Y	S	P	S	S	T	N	S	Q	P	W	H	F	I	V	A	S	T	E	E	G	K	A	R	V	A	K	S	A	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		E	L	Q	D	T	I	F	K	R	Q	S	V	R	K	F	.	K	N	Q	D	V	S	D	E	D	I	L	K	X	I	K	A	A	G	A	A	P	S	G	K	N	I	Q	N	W	H	F	V	V	I	K	R	R	D	L	X	E	K	I	A	D	V	I	T	K	K	Q	Q	E	I	L	V	E	X	D	K	V	S	V	D
Template Known Secondary structure												B				B	.		S																	T	S			G	G	G																																		T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
									67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	N	Y	V	F	N	E	R	K	M	L	D	A	S	H	V	V	V	F	C	A	K	T	A	M	D	D	V	W	L	K	L	V	V	D	Q	E	D	A	D	G	R	F	A	T	P	E	A	K	A	A	N	D	K	G	R	K	F	F	A	D	M	H	R	K	D	L	H	D	D	A	E	W	M
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	N	R	F	R	K	F	V	K	N	F	T	L	F	Y	L	K	A	P	V	L	V	L	V	F	T	K	V	Y	N	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	E	L	E	L	I	D	A	P	K	E	T	I	D	K	L	F	I	R	N	P	G
Template Known Secondary structure														T	G	G	G	G	G	S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T											T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																													.	.														.	.	.	.
Query SS confidence																													.	.														.	.	.	.
Query Sequence		A	K	Q	V	Y	L	N	V	G	N	F	L	L	G	V	A	A	L	G	L	D	A	V	P	I	E	G	.	.	F	D	A	A	I	L	D	A	E	F	G	L	K	.	.	.	.	E	K	G	Y	T	S	L	V	V	V	P	V	G	H	H	S	V	E	D	F	N	A	T	L	P	K	S	R	L	P	Q	N	I	T
Query Conservation																													.	.														.	.	.	.
Alig confidence																													.	.														.	.	.	.																					.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		X	Q	S	L	G	A	A	I	E	N	F	T	L	S	A	I	E	L	G	Y	G	S	C	W	L	T	S	Q	N	Y	A	A	D	E	I	E	A	V	L	E	A	E	T	G	F	E	K	G	E	Y	F	L	G	A	X	L	A	L	G	V	P	E	D	N	L	K	.	.	.	.	S	P	S	K	K	P	V	E	E	I
Template Known Secondary structure																			T	T								T	T	G	G	G																	T	T												B		S	S			.	.	.	.							G	G	G	G
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.
		214	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	T	F	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions