Job Description P38489 Confidence 100.00% Date Thu Jan 5 11:58:09 GMT 2012 Rank 34 Aligned Residues 177 % Identity 17% Template c3ek3A_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nitroreductase; PDBTitle: crystal structure of nitroreductase with bound fmn (yp_211706.1) from2 bacteroides fragilis nctc 9343 at 1.70 a resolution Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	S	V	A	L	K	R	H	S	T	K	A	F	D	A	S	K	K	L	T	P	E	Q	A	E	Q	I	K	T	L	L	Q	Y	S	P	S	S	T	N	S	Q	P	W	H	F	I	V	A	S	T	E	E	G	K	A	R	V	A	K	S	A	A	G	N	Y	V	F	N	E	R	K	M	L	D	A	S	H	V
Query Conservation
Alig confidence																	.																																																										.	.	.	.	.	.	.
Template Conservation																	.																																																										.	.	.	.	.	.	.
Template Sequence		E	V	L	E	T	I	K	A	R	R	S	V	R	A	Y	.	D	R	K	Q	I	P	A	D	D	L	N	A	I	L	E	A	G	A	Y	A	P	S	G	X	H	Y	E	T	W	H	F	T	A	V	C	N	T	V	K	L	E	E	L	N	E	R	I	K	G	A	F	A	K	S	D	D	K	.	.	.	.	.	.	.
Template Known Secondary structure												B				B	.		S																	T	S			G	G	G																												T					.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																										.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	C	A	K	T	A	M	D	D	V	W	L	K	L	V	V	D	Q	E	D	A	D	G	R	F	A	T	P	E	A	K	A	A	N	D	K	G	R	K	F	F	A	D	M	H	R	K	D	L	H	D	D	A	E	W	M	A	K	Q	V	Y	L	N	V	G	N	F	L	L	G	V	A	A	L	G	L	D	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	R	E	R	G	H	S	E	T	Y	C	C	Y	Y	H	A	P	T	L	V	I	V	S	N	E	P	K	Q	W	W	A	G	X	D	C	A	C	A	I	E	N	X	F	L	A	A	T	S	L	G	I	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T		S	S			T	T	T	T		S									S	S	S	T	T																			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																												77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		162	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.
Query Sequence		V	P	I	E	G	F	.	.	.	.	.	.	.	D	A	A	I	L	D	A	E	F	G	L	K	E	K	G	Y	T	S	L	V	V	V	P	V	G	H	H	S	V	E	D	F	N	A	T	L	P	K	S	R	L	P	Q	N	I	T	L	T	E	V
Query Conservation								.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.															.																		.	.	.	.
Template Conservation																													.																		.	.	.	.
Template Sequence		C	W	I	N	Q	L	G	T	T	C	D	D	P	E	V	R	A	Y	L	T	S	L	G	V	P	E	N	.	H	K	V	Y	G	C	V	A	L	G	Y	K	A	E	G	A	L	.	.	.	.	L	K	E	K	T	V	K	A	G	T	I	T	I	V
Template Known Secondary structure						T	T	T	T	T	T	T	S											T			T	T	.												B		T	T			.	.	.	.								T	T
Template Predicted Secondary structure																													.																		.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions