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Job DescriptionP38489
Confidence99.97%DateThu Jan 5 11:58:09 GMT 2012
Rank42Aligned Residues159
% Identity16%Templatec3bm2B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:protein ydja; PDBTitle: crystal structure of a minimal nitroreductase ydja from escherichia2 coli k12 with and without fmn cofactor
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  DIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHV
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Template Sequence  DALELLINRRSASRL. AEPAPTGEQLQNILRAGXRAPDWHFFVIEGEGRERFSAVLEQGAIAAGSDDKA. . . . . . . . . . .
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   2.......10...... ...20.........30.........40.........50.........60.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDA
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IDKARNAPFRAPLIITVVAKVPRWEQEXSAGCAVXAXQXAAVAQGFGG
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   76...80.........90.........100.........110.........120...
 
   162.... ...170.........180.........190.........200.........
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Query Sequence  VPIEG. . FDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLP
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Template Sequence  IWRSGALTESPVVREAFGCREQ. DKIVGFLYLGTPQL. . . . VPDPTPFVT
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   130.........140.........150. ........160..... ....170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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