Job Description P38489 Confidence 18.78% Date Thu Jan 5 11:58:09 GMT 2012 Rank 51 Aligned Residues 32 % Identity 19% Template c2p1nD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		150	.	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	L	G	V	A	A	L	G	L	D	A	V	P	.	.	.	.	.	.	.	.	.	.	I	E	G	F	D	A	A	I	L	D	A	E	F	G	L	K	E	K
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	L	A	A	N	Y	L	N	I	K	N	L	L	D	L	T	C	Q	T	V	A	D	M	I	K	G	K	T	P	E	E	I	R	T	T	F	N	I	K	N	D
Template Known Secondary structure										T																	T	T										S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions