 |
Job Description | Q57083 | Confidence | 56.86% | Date | Thu Jan 5 12:37:13 GMT 2012 |
Rank | 286 | Aligned Residues | 40 |
% Identity | 8% | Template | c3pvpA_ |
PDB info |
PDB header:dna binding protein/dna | Chain: A: PDB Molecule:chromosomal replication initiator protein dnaa; |
PDBTitle: structure of mycobacterium tuberculosis dnaa-dbd in complex with box22 dna
|
Resolution | 2.30 Å |
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | L | R | A | F | E | A | A | G | R | . |
T | G | A | F | A | L | A | A | S | E | L | E | L | S | P | S | A | I | S | H | A | I | R | K | L | E | N | L | L |
Query Conservation |   |
  |   |
|   |   |
|   |
|
|   |   | . |   |
|
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |   |   |
Template Sequence |   |
R | Q | I | A | M | Y | L | C | R | E | L | T | D | L | S | L | P | K | I | G | Q | A | F | G | R | D | H | T | T | V | M | Y | A | Q | R | K | I | L | S | E | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
444 | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|