Job Description Q57083 Confidence 100.00% Date Thu Jan 5 12:37:13 GMT 2012 Rank 1 Aligned Residues 286 % Identity 24% Template c3hhgF_ PDB info PDB header:transcription regulator Chain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis. Resolution 3.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	L	N	L	L	R	A	F	E	A	A	G	R	T	G	A	F	A	L	A	A	S	E	L	E	L	S	P	S	A	I	S	H	A	I	R	K	L	E	N	L	L	D	V	R	L	F	Q	R	S	T	R	E	I	T	L	T	K	E	G	E	I	L	L	E	H	I	Q	R	G	F	N	E	L	Q	Q	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	N	S	E	E	L	T	V	F	V	Q	V	V	E	S	G	S	F	S	R	A	A	E	Q	L	A	M	A	N	S	A	V	S	R	I	V	K	R	L	E	E	K	L	G	V	N	L	L	N	R	T	T	R	Q	L	S	L	T	E	E	G	A	Q	Y	F	R	R	A	Q	R	I	L	Q	E	M	A	A	A	E
Template Known Secondary structure																	T	S	S	S					T	T	T	T																		T	S					T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	L	V	T	A	D	E	S	R	.	.	.	P	L	R	L	H	T	A	P	S	F	A	H	Q	W	L	L	P	R	L	G	K	F	I	R	E	N	P	S	I	D	L	R	L	S	A	S	T	E	Y	A	R	F	E	Q	D	D	F	D	L	D	I	V	Y	G	E	P	R	P	S	P	Y	E	K	I	P	L	A	V
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		T	E	M	L	A	V	H	E	I	P	Q	G	V	L	S	V	D	S	A	M	P	M	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	I	A	L	R	A	G	E	L	D	D	S	G	L	R	A	R	H	L	F	D
Template Known Secondary structure							T	T	S																		T												S	T	T									S	S	S					T	T	S	S	S							S				S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																														.
Query SS confidence														.	.	.																														.
Query Sequence		E	E	L	T	P	L	C	S	P	Q	L	A	.	.	.	E	R	L	K	K	P	E	D	L	Y	A	L	T	L	I	Q	C	D	V	Q	L	Y	Q	W	K	G	W	F	E	.	A	N	K	M	T	P	P	N	N	Y	G	L	R	F	D	R	S	F	M	A	I	A	A	A	V	D	G	L	G	V	V	L	E	S	K
Query Conservation														.	.	.																														.
Alig confidence														.	.	.																														.
Template Conservation
Template Sequence		S	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D
Template Known Secondary structure																				S	S	G	G	G	G	G	T	S						S	S	T	T	G	G	G							S	S	S	S							S	S			S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	E	R	E	I	A	S	G	K	L	V	C	P	L	V	N	S	T	S	E	I	H	Y	I	G	H	Y	L	V	F	P	Q	H	Q	H	M	H	S	A	L	D	V	F	K	T	W	L	L	N	E	L	N
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	.	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L	G
Template Known Secondary structure											T	S	S				.		T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure																	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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