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Job DescriptionQ57083
Confidence100.00%DateThu Jan 5 12:37:13 GMT 2012
Rank3Aligned Residues283
% Identity17%Templatec3fzjC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: tsar low resolution crystal structure, tetragonal form
Resolution7.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  APLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLA
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Template Sequence  LKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQE
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   87.. 90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  LVT. . . ADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVE
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Template Sequence  EIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQ
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   164. ....170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  EL. . . . . . . . TPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVL
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Template Sequence  PLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEPKLGLVCESFLALPGVVAHSDLLTT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   236...240.........250.........260.........270.........280.........290.
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Query Sequence  ESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNEL
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Template Sequence  MPRTLYERNAFKDQLCSI. . PLQDALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHA
Template Known Secondary structure  SSTTGGG
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   242.......250......... 260.........270.........280.........290.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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