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Job DescriptionQ57083
Confidence99.61%DateThu Jan 5 12:37:13 GMT 2012
Rank17Aligned Residues196
% Identity15%Templatec2ql3G_
PDB info PDB header:transcriptionChain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130... ......140.........150.........160.........
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Query Sequence  SRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEY. . . ARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLC
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Template Sequence  AGPIAVGCYPALGPTILPSXLYAFTAEYPRASVEFREDTQNRLRTQLEGGELDVAIVYDLDLSPEWQTVPLXTREPXVVL
Template Known Secondary structure 

GGGTTTT
TT

TS
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   170....... ..180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  SPQLAERL. . . . KKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREI
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Template Sequence  GAEHPLAGVDGPVRLADLAEHPXVLLDAPPSTNHAXDVCREAGFAPRVAYRTANFETARAFVGRGLGWTLLLQRPRVDVT
Template Known Secondary structure  TTSTTTTS
S
B
GGGGTTS


TTTT



S
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BS


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   180.........190.........200.........210.........220.........230.........240.........250.........
 
   246...250.........260.........270.........280........
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Query Sequence  ASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLL
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Template Sequence  YEGLPVVVKPIAEPKPASVAVVVAWHQEATLSRVARAFIRFVT
Template Known Secondary structure  TTS
B
B
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TT



T
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   260.........270.........280.........290.........300..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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