Job Description P0AF18 Confidence 99.46% Date Wed Jan 25 15:20:32 GMT 2012 Rank 80 Aligned Residues 281 % Identity 12% Template d4ubpc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.55

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	.	.	.	.	.	.	.	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.											.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		G	G	I	D	T	H	V	H	F	I	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	V	D	V	A	L	A	N	G	I	T	T	L	F	G	.	G	G	T	G	P	A	E	G	S	K	A	T	T	V	T	P	G	P	W	N	I	E	K	M	L	K	S	T	E	G	L	P	I	N	V
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								T	T							.				S	S							S	S																T	T		S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.																	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		G	L	H	L	E	G	P	W	L	N	L	V	K	K	G	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	.	.	H	S	N	A	T	L	K	E	A	K
Query Conservation																																																																						.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	G	K	G	H	G	S	S	I	A	P	I	M	E	Q	I	D	A	G	A	A	G	L	I	H	E	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	P	A	S	I	D	R	S	L	T	V	A	D	E	A	D	V	Q	V	A	I	H	S	D	T	L	N	E	A	G	F	L	E	D
Template Known Secondary structure				B						S	S											T			B			B	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T		B				B			T	T		S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.															.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		T	L	R	A	I	N	G	R	V	I	H	S	F	H	V	E	G	A	G	G	G	H	A	P	D	I	M	A	M	A	G	H	P	.	N	V	L	P	S	S	T	N	P	T	R	P	F	T	V	N	T	I	D	E	H	L	D	M	L	M	V	C	H	H	L	K	Q	N	I	P	E	D	V	A	F	A	D	S	R	I
Template Known Secondary structure							T	T						T	T	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G	S	T	.	T				B			S	T	T	S	S		B	T	T														T			T	T	S											S
Template Predicted Secondary structure																																			.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		285	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	.	.	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V
Query Conservation				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	E	T	I	A	A	E	D	I	L	H	D	L	G	I	I	S	M	M	S	T	D	A	L	A	M	G	R	A	G	E	M	V	L	R	T	W	Q	T	A	D	K	M	K	K	Q	R	G	P	L	A	E	E	K	N	G	S	D	N	F	R	L	K	R	Y	V	S	K	Y	T	I	N	P	A	I	A	Q	G	I
Template Known Secondary structure															T	T	S	S		B					B	T	T	S	S		T	T																			S		T	T			S	S												T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	R	L	G	T	L	A	A	G	K	V	A	N	L	T	A	F	T	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	E	V	G	S	I	E	E	G	K	F	A	D	G	D	L	I	H	D	T
Template Known Secondary structure		T	T	T	S	S	S			T	T	S					T					S
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions