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Job DescriptionP0AF18
Confidence69.58%DateWed Jan 25 15:20:32 GMT 2012
Rank153Aligned Residues273
% Identity14%Templated2dvta1
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80.........90.........100.........110.........120.........130.
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Query Sequence  SPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLE
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Template Sequence  MQGKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQ. . . . . . . . . . . . . . . . . . . . DTRLKLMDAHGIETMILSLN
Template Known Secondary structure 

S

GGGTTTS
SS
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   1........10.........20.........30.........40 .........50.........60
 
   132.......140.........150.........160.........170.........180...... ...190......
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Query Sequence  GPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLAN. . . . . . . AGIVVSAGHS. . . . . . . .
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Template Sequence  APAVQAIPDRRKAIEIARRANDVLAEECAKRPDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPL
Template Known Secondary structure  SSGGGG



TTT


TTSTT


SSB

TT

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B
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   61........70.........80.........90.........100.........110.........120.........130.........140
 
   197..200.........210.........220.........230. ........240.........250
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Query Sequence  . . . . NATLKEAKAGFRAGITFATHLYNAMPYITGREPGL. . . . . . . . . . . . . . . . . . . . . . AGAILDEADIYCGIIADGL
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Template Conservation     
             
 

 

                                        
    
 
  
  
 
Template Sequence  YYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMG
Template Known Secondary structure 
TTSGGGT






GGG
GGGTT
GGGSGGGTTT
TT

SGGG
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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   251........260.........270...... ...280.........290.........300.........310.........
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Query Sequence  HVDYANIRNAKRLKGDKLCLVTDATA. . . . . . . . . . . PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRN
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Template Sequence  EGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPF. . ENIDHASD
Template Known Secondary structure  TTTTTT

S

SSS
SS

TT


TTT
GGG



TTT..S
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   221........230.........240.........250.........260.........270.........280.........290 ........
 
   320.........330.........340......
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Query Sequence  LVEHCGIALDEVLRMATLYPARAIGVE
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Template Sequence  WFNATSIAEADRVKIGRTNARRLFKLD
Template Known Secondary structure  SSS
TTT

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   299300.........310.........320.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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