Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF18
Confidence98.01%DateWed Jan 25 15:20:32 GMT 2012
Rank125Aligned Residues287
% Identity11%Templated1vfla1
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Adenosine/AMP deaminase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52... ....60....... ..70.........80.........90.... .....100.........110.
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Query Sequence  SPGF. . . . IDVQLNGCGGVQ. . . . . . . . . . FNDTAEAVSVETLEIMQKANEKSGCTN. . . . . . YLPTLITTSDELMKQGV
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Template Sequence  TPAFDKPKVELHVHLDGAIKPETILYYGKRRGIALPADTPEELQNIIGMDKPLTLPDFLAKFDYYMPAIAGCRDAIKRIA
Template Known Secondary structure 

TT
S


BBGGG


TT


S
SS

SS


TT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
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Query Sequence  RVMREYLAKHPNQALGLHLEGPWLNLVKKGTHN. . . . . . . . . . . . . PNFVRKPDAALVDFLCENADVITKVTLAPEMVPA
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Template Sequence  YEFVEMKAKDGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVSLVNQGLQEGERDFGVKVRSILCCMRHQPSWSS
Template Known Secondary structure  TT
SGGG

SS
SS
GGG



S



TT
GGG
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
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Query Sequence  EVISKLANA. . . . . . GIVVSAGHSNAT. . . . . . . LKEAKAGFRAGITFATHLYNAMPYITGREPGLAGAILDEADIYCGI
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Template Sequence  EVVELCKKYREQTVVAIDLAGDETIEGSSLFPGHVQAYAEAVKSGVHRTVHAGEVG. . . . . . . . SANVVKEAVDTLKTER
Template Known Secondary structure  TBTTTS
TTSTTGGG
T
SSSS........
TS

S
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   161........170.........180.........190.........200.........210...... ...220.........230..
 
   246...250.........260.........270.........280... ......290.........300........ .310.........320...
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Query Sequence  IADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIE. QFIFAGKTIYYRNGLCVDENGTLSG. SSLTMIEGVRNLVEH
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Template Sequence  LGHGYHTLE. DTTLYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRFKNDQVNYSLNTDDPLIFKSTLDTDYQMTKKD
Template Known Secondary structure 
GGGGG.STT

SSS
TTS

TT


B
T

T
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   233......240. ........250.........260.........270.........280.........290.........300.........310.
 
   324.....330.........340........
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Query Sequence  CGIALDEVLRMATLYPARAIGVEKR
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Template Sequence  MGFTEEEFKRLN. INAAKSSFLPED
Template Known Secondary structure  T


.TS
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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