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Job DescriptionP0AF18
Confidence100.00%DateWed Jan 25 15:20:32 GMT 2012
Rank21Aligned Residues349
% Identity15%Templatec3lnpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  YALTQGRIFTGHE. . . . FLDDHAVVIADGLIKSVCPVAELP. PEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVS
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Template Sequence  LRINSHWIIPIENTVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLXPGWVNAHGHAAXSLFRGLADDLPL
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SS



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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   77..80... ......90.........100.........110.........120.........130.....
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Query Sequence  VETLEIM. . . . . . . . . . . . . . . . . . . . . QKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWL
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Template Sequence  XTWLQEHVWPAEAQHVDEHFVKQGTELAIAEXIQSGTTTFADXYFY. . . . . . . . . PQQSGEAALAAGIRAVCFAPVLDFP
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   107..110.........120.........130.........140.........150.. .......160.........170.......
 
   136...140.........150.........160.........170....... ..180.........190.........200........
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Query Sequence  NLVKKGTHNPNFVRKPDAALVDFLCENADVITKVTLAPEMVP. . . . . . . AEVISKLANAGIVVSAGHSNATLKEAKAGFR
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Template Sequence  TNYAQNADEYIRKAIECNDRFNNHPXNEQGLVQIGFGPHAPYTVSDEPLKEITXLSDQLDXPVQIHLHETDFEVSESLET
Template Known Secondary structure 
SS
SSS
GGGTT



TTTS
T

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   178.180.........190.........200.........210.........220.........230.........240.........250.......
 
   209210.........220.........230.........240.........250.........260.........270.........280........
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Query Sequence  AGITFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQFIFA
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Template Sequence  FNKR. . . . . . . . . . . . . . . . . PTQRLADIGFLNERVSCVHXTQVDDGDIKILQKT. . . GASIIHCPESNLKLASGFC. . .
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   258.260. ........270.........280.........290..... ....300.........310....
 
   289290.........300.........310.. .......320.........330.........340.........350........
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Query Sequence  GKTIYYRNGLCVDENGTLSGSSLT. . . . . . . . . . MIEGVRNLVEHCGIALDEVLRMATLYPARAIGVEKRLGTLAAGKVA
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Template Sequence  PIAKLSAANIPLAIGTDGAASNNDLDXFSETKTAALLAKGVSQDASAIPAIEALTXATLGGARALGIDDITGSLKPGKAA
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TT





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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   359360...... ...370.........380..
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Query Sequence  NLTAFTPD. . . . . . . . . . . . . . . . . . . . FKITKTIVNGNEVVTQ
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Template Sequence  DIQAIDLNTLSSQPVFDPVSHXVYCTKSTQVSHVWVNGRCLLKN
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SGGG
S
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GGGTTT
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   395....400.........410.........420.........430........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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