Job Description P0AF18 Confidence 99.13% Date Wed Jan 25 15:20:32 GMT 2012 Rank 100 Aligned Residues 294 % Identity 9% Template c3jzeC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:dihydroorotase; PDBTitle: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc)2 from salmonella enterica subsp. enterica serovar typhimurium str. lt2 Resolution 1.80 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	I	L	S	P	G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	V	L	K	I	R	R	P	D	D	W	H	V	H	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	L	K	T	V	V	P	Y	T	S	E	I	Y	G	R	A	I	V	M	P	N	L	A	S	P	I	T	T	V	D	A	A	I	A	Y	R	Q	R	I	L	D	A	V	P	A	G	H
Template Known Secondary structure																			S	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S								S	S	S				S															S		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.														.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200
Predicted Secondary structure																																																																						.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.
Query Sequence		G	L	H	L	E	G	P	W	L	N	L	V	K	K	G	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	.	.	.	.	.	.	H	S	N	A	T	L
Query Conservation																																																																						.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	T	P	L	M	T	C	Y	L	T	D	S	L	D	A	D	E	L	E	R	G	F	H	E	G	V	F	T	A	A	L	Y	P	A	N	A	T	T	N	S	S	H	G	V	T	S	V	D	A	I	M	P	V	L	E	R	M	E	K	L	G	I	P	L	L	V	H	G	E	V	T	H	A	D	V	D	I	F	D
Template Known Secondary structure													T	T												T	T	S							B	T	T	S	S	T	T		T	T	S	B	S		T	T	T	T											T												T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																									.	.																																																				.	.	.	.
Query SS confidence																									.	.																																																				.	.	.	.
Query Sequence		K	E	A	K	A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	.	.	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	.	.	.	.
Query Conservation																									.	.																																																				.	.	.	.
Alig confidence																									.	.																																																				.	.	.	.
Template Conservation
Template Sequence		R	E	A	R	F	I	D	T	V	M	E	P	L	R	Q	R	L	T	A	L	K	V	V	F	E	H	I	T	T	K	D	A	A	Q	Y	V	R	D	G	N	D	Y	L	A	A	T	I	T	P	Q	H	L	M	F	N	R	N	D	M	L	V	G	G	I	R	P	H	L	Y	C	L	P	I	L	K	R	N	I	H	Q
Template Known Secondary structure										T								S	T	T							S			S										S		T	T																			T	T	S			G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
								275	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	T	A	P	A	G	A	N	I	.	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K
Query Conservation		.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.									.																		.	.																		.	.
Template Conservation																																		.	.																		.	.
Template Sequence		Q	A	L	R	E	L	V	A	S	G	F	T	R	A	F	L	G	T	D	S	A	P	H	S	R	H	R	K	E	T	S	C	.	.	G	C	A	G	C	F	N	A	P	S	A	L	G	S	Y	A	A	.	.	V	F	E	E	M	N	A	L	A	H	F	E	A	F	C	S	L	N	G	P	Q	F	Y	G	L	P	M
Template Known Secondary structure										T	T		T	T							B				B					S	S	S	S	.	.								T	T	T								.	.					T	T		G	G	G							T							T
Template Predicted Secondary structure																																		.	.																		.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	T	L	A	A	G	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	T	G	W	V	E	L	V	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions