Job Description P0AF18 Confidence 100.00% Date Wed Jan 25 15:20:32 GMT 2012 Rank 43 Aligned Residues 364 % Identity 19% Template c3gipB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-acyl-d-glutamate deacylase; PDBTitle: crystal structure of n-acyl-d-glutamate deacylase from2 bordetella bronchiseptica complexed with zinc, acetate and3 formate ions. Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Y	A	L	T	Q	G	R	I	F	T	G	H	E	.	F	L	D	D	H	A	V	V	I	A	D	G	L	I	K	S	V	C	P	V	A	E	L	P	P	E	I	E	Q	R	S	L	N	G	A	I	L	S	P	G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L
Query Conservation															.
Alig confidence															.																							.																																					.	.	.	.	.	.	.
Template Conservation																																						.																																					.	.	.	.	.	.	.
Template Sequence		F	K	I	T	G	G	W	I	I	D	G	T	G	A	P	R	R	R	A	D	L	G	V	R	D	G	R	I	A	A	I	G	E	L	G	A	.	H	P	A	R	H	A	W	D	A	S	G	K	I	V	A	P	G	F	I	D	V	H	G	H	D	D	L	M	F	V	E	K	P	D	L	R	.	.	.	.	.	.	.
Template Known Secondary structure						S	S					S	S	S												T	T									S	S	.	S		B	S	S					T	T	S									S	S				T	T						T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.																																					.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.																							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W	L	N	L	V
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	W	K	T	S	Q	G	I	T	T	V	V	V	G	N	C	G	V	S	A	A	P	A	P	L	P	G	N	T	A	A	A	L	A	L	L	G	E	T	P	L	F	A	D	V	P	A	Y	F	A	A	L	D	A	Q	R	P	M	I	N	V	A	A	L	V	G	H	A	N	L	R	L	A	A	M	R
Template Known Secondary structure		.	.	.	.	.				T	T	T									T	T			S		S				T	T				G	G	G	G	G	T		S	S				S	S											S			S	S																	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	G	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	.	.	.	.	.	.	.	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S	N	A	T	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	Q	A	A	P	T	A	A	E	Q	Q	A	M	Q	D	M	L	Q	A	A	L	E	A	G	A	V	G	F	S	T	G	L	A	Y	Q	P	G	A	V	A	Q	A	A	E	L	E	G	L	A	R	V	A	A	E	R	R	R	L	H	T	S	H	I	R	N	E	A	D	G	V	E	A	A	V	E	E	V	L	A
Template Known Secondary structure		S	T	T	S																					T								T	T	S	T	T	G	G	G																T	T								S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
																															201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	A	K	A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																																																												.	.	.
Template Sequence		I	G	R	G	T	G	C	A	T	V	V	S	H	H	K	C	M	M	P	Q	N	W	G	R	S	R	A	T	L	A	N	I	D	R	A	R	E	Q	G	V	E	V	A	L	D	I	Y	P	Y	P	G	S	S	T	I	L	I	P	.	.	.	E	R	A	E	T	I	D	D	I	R	I	T	W	S	T	P	H	P	E
Template Known Secondary structure													T	T					S	G	G	G	T	T	T															T									S		S								G	.	.	.	G	G	T	T	T	S	S								S	S		G	G
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	S	G	E	Y	L	A	D	I	A	A	R	W	G	C	D	K	T	T	A	A	R	R	L	A	P	A	G	A	I	Y	F	A	M	D	E	D	E	V	K	R	I	F	Q	H	P	C	C	M	V	G	S	D	G	L	P	N	D	A	R	P	H	P	R	L	W	G	S	F	T	R	V	L	G	R	Y	V	R	E	A
Template Known Secondary structure		G	T	T		B									T	S											S																			S	T	T									T	T		S	S			T																	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.																.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G	T	L	A	A	G	K	V	A	N	L	T	A	F	T	P	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	K	T	I	V	N	G	N	E	V	V	T	Q
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		R	L	M	T	L	E	Q	A	V	A	R	M	T	A	L	P	A	R	V	F	G	F	A	E	.	R	G	V	L	Q	P	G	A	W	A	D	V	V	V	F	D	P	D	T	V	A	D	R	A	T	W	D	E	P	T	L	A	S	V	G	I	A	G	V	L	V	N	G	A	E	V	F	P	Q
Template Known Secondary structure			S	S										T								T		T	T	.		S	S			T	T	S	B								T	T	T		B					S	S	S	T	T				B	S							T	T					S	S
Template Predicted Secondary structure																										.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.