Job Description P0AF18 Confidence 100.00% Date Wed Jan 25 15:20:32 GMT 2012 Rank 41 Aligned Residues 351 % Identity 18% Template c3feqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative amidohydrolase; PDBTitle: crystal structure of uncharacterized protein eah89906 Resolution 2.63 Å

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		3	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	L	T	Q	G	R	I	F	T	G	H	E	.	.	F	L	D	D	H	A	V	V	I	A	D	G	L	I	K	S	V	C	P	V	A	E	L	P	P	E	I	E	Q	R	S	L	N	G	A	I	L	S	P	G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		V	L	Q	G	G	N	V	L	D	L	E	R	G	V	L	L	E	H	H	H	V	V	I	D	G	E	R	I	V	E	V	T	D	R	P	V	D	L	P	N	A	Q	A	I	D	V	R	G	K	T	V	M	P	G	F	I	D	C	H	V	H	V	L	A	S	N	A	N	L	G	V	N	A	T	Q	P	N	I	L	A
Template Known Secondary structure											T	T	T	T												T	T								S					S	S							T	T	S													T	T			S	S								S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure						.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	M	Q	.	.	.	.	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W	L	N	L	V	K	K	G	T	H	N	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.																																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																			.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		A	I	R	S	L	P	I	L	D	A	M	L	S	R	G	F	T	S	V	R	D	A	G	G	A	D	.	.	.	.	.	.	.	.	.	W	S	L	M	Q	A	V	E	T	G	L	V	S	G	P	R	I	F	P	S	G	K	A	L	S	Q	T	G	G	H	G	D	F	R	P	R	L	E	P	C	S	C	C	F	R
Template Known Secondary structure															T	T							S	S	S			.	.	.	.	.	.	.	.	.									T	T	S	S		S								S					T	T	S	T	T												S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
										146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.															.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	P	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S	N	A	T	L	K	E	A
Query Conservation		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation																																																																									.	.
Template Sequence		T	G	A	I	A	R	V	V	D	G	V	E	G	V	R	L	A	V	R	E	E	I	Q	K	G	A	T	Q	I	K	I	M	A	S	G	G	V	A	S	P	T	D	P	I	A	N	T	Q	Y	S	E	D	E	I	R	A	I	V	D	E	A	E	A	A	N	T	Y	V	M	A	H	.	.	A	Y	T	G	R	A	I
Template Known Secondary structure		T	T		S						S														T	T		S	S						B			S	S	S	S	S			T	T	S	B		S															T	T							.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	A	V	R	C	G	V	R	T	I	E	H	G	N	L	V	D	E	A	A	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	H	E	H	G	A	F	V	V	P	T	L	V	T	Y	D	A	L	A	K	H	G	A	E	F	G	M	P	P	E	S	V	A	K	V	A	S	V	Q
Template Known Secondary structure								T		S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T							T									S	T	G	G	G	T			T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G	T	L	A	A	G	K	V	A	N	L	T	A	F
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		Q	K	G	R	E	S	L	E	I	Y	A	N	A	G	V	K	M	G	F	.	G	S	D	L	L	G	E	M	H	A	F	Q	S	G	E	F	R	I	R	A	E	V	L	G	N	L	E	A	L	R	S	A	T	T	V	A	A	E	I	V	N	M	Q	G	Q	L	G	V	I	A	V	G	A	I	A	D	L	V	V	L
Template Known Secondary structure															T			B			.						G	G	G	G	G	G	G	G																			T	T							T	T		B	T	T	B	S	S		S	T	T	S	B
Template Predicted Secondary structure																					.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		364	.	.	.													.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	D	F	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	K	T	I	V	N	G	N	E	V	V	T	Q
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	N	P	L	E	D	I	G	V	V	A	D	E	G	A	R	V	E	Y	V	L	Q	R	G	T	L	V	K	R	Q
Template Known Secondary structure		S	S		T	T	T		G	G	G	T	S	S	S	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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