Job Description P0AF18 Confidence 99.97% Date Wed Jan 25 15:20:32 GMT 2012 Rank 58 Aligned Residues 334 % Identity 16% Template c2ogjB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: crystal structure of a dihydroorotase Resolution 2.62 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Y	A	L	T	Q	G	R	I	F	T	G	H	E	F	L	D	D	H	A	V	V	I	.	A	D	G	L	I	K	S	V	C	P	V	A	E	L	P	P	E	I	E	Q	R	S	L	N	G	A	I	L	S	P	G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V	S	V	E	T	L
Query Conservation																								.
Alig confidence													.	.										.																		.	.																																			.	.	.	.
Template Conservation													.	.																												.	.																																			.	.	.	.
Template Sequence		I	L	L	T	N	V	K	P	V	G	F	.	.	S	Q	S	S	T	D	I	L	I	G	G	D	G	K	I	A	A	V	G	S	A	L	Q	A	P	A	D	.	.	T	Q	R	I	D	A	A	F	I	S	P	G	W	V	D	L	H	V	H	I	W	H	G	G	T	D	I	S	I	R	P	S	E	C	.	.	.	.
Template Known Secondary structure													.	.				S							T	T	S	B						S	S				S	S	S	.	.																						T	T	T	S	S	S				G	G	G	S	.	.	.	.
Template Predicted Secondary structure													.	.																												.	.																																			.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W	L	N	L	V	K	K	G	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C
Query Conservation
Alig confidence		.	.	.	.	.	.																.																																													.	.
Template Conservation		.	.	.	.	.	.																.																																													.	.
Template Sequence		.	.	.	.	.	.	G	A	E	R	G	V	T	T	L	V	D	A	G	S	A	.	G	E	A	N	F	H	G	F	R	E	Y	I	I	E	P	S	R	E	R	I	K	A	F	L	N	L	G	S	I	G	L	V	A	C	N	R	V	P	E	L	R	D	I	K	.	.	D	I	D	L	D	R	I	L	E	C	Y	A
Template Known Secondary structure		.	.	.	.	.	.	S	G	G	G	T											.		G	G	G	S	T	T					T	T	T	T		S	S								S	S	T	T	T	T	T	T	T	T	T	S		S		S	S	G	G	.	.	G
Template Predicted Secondary structure		.	.	.	.	.	.																.																																													.	.
Template SS confidence
								95	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure														.	.	.	.	.	.	.	.																		.	.
Query SS confidence														.	.	.	.	.	.	.	.																		.	.
Query Sequence		E	N	A	D	V	I	T	K	V	T	L	A	.	.	.	.	.	.	.	.	P	E	M	V	P	A	E	V	I	S	K	L	A	N	A	G	I	.	.	V	V	S	A	G	H	S	N	A	T	L	K	E	A	K	A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G
Query Conservation														.	.	.	.	.	.	.	.																		.	.
Alig confidence														.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		E	N	S	E	H	I	V	G	L	V	R	A	S	H	V	I	T	G	S	W	G	V	T	P	V	K	L	G	K	K	I	A	K	I	L	K	V	P	X	X	V	H	V	G	E	P	P	A	L	Y	D	E	V	L	E	I	L	G	P	G	D	V	V	T	H	C	F	N	G	K	S	G	S	S	I	X	E	D	E	D
Template Known Secondary structure		T	T	T	T	T								S					T	T			S														T									S	T	T	S											T	T					S	T	B				T	T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G	K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	N	L	A	E	R	C	E	G	I	R	L	D	I	G	H	G	G	A	S	F	S	F	K	V	A	E	A	A	I	A	R	G	L	L	P	F	S	I	S	T	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	H	S	X	N	F	P	V
Template Known Secondary structure																			S	S	S	S	B											T	T				S						B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290																												.	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.																				.	.	.	370	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	M	I	E	G	V	R	N	L	V	E	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G	T	L	A	A	G	K	V	A	N	L	T	A	F	T	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	I	T	K
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																							.
Template Sequence		W	D	L	A	T	T	X	S	K	L	L	S	.	V	D	X	P	F	E	N	V	V	E	A	V	T	R	N	P	A	S	V	I	R	L	.	D	X	E	N	R	L	D	V	G	Q	R	A	D	F	T	V	F	D	L	V	D	A	D	L	E	A	T	D	S	N	G	D	V	S	R	L	K	R	L	F	E	P	R	Y
Template Known Secondary structure														.	T	T									T	T	T							T	T		.			T	T	T	T	S	T	T	S	B																		T	T	S
Template Predicted Secondary structure														.																							.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	N	G	N	E	V	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	G	A	E	A	I	A	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions