Job Description P0AF18 Confidence 100.00% Date Wed Jan 25 15:20:32 GMT 2012 Rank 8 Aligned Residues 353 % Identity 15% Template c2i9uA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cytosine/guanine deaminase related protein; PDBTitle: crystal structure of guanine deaminase from c. acetobutylicum with2 bound guanine in the active site Resolution 2.05 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																									.
Query SS confidence															.	.	.	.																									.
Query Sequence		M	Y	A	L	T	Q	G	R	I	F	T	G	H	.	.	.	.	E	F	L	D	D	H	A	V	V	I	A	D	G	L	I	K	S	V	C	P	V	A	E	L	.	P	P	E	I	E	Q	R	S	L	N	G	A	I	L	S	P	G	F	I	D	V	Q	L	N	G	C	G	G	V	Q	F	N	D	T	A	E	A	V
Query Conservation															.	.	.	.																									.
Alig confidence															.	.	.	.																									.
Template Conservation
Template Sequence		L	K	I	F	K	G	N	L	I	F	T	K	T	S	D	K	F	T	I	M	K	D	S	Y	I	V	V	I	D	G	K	I	A	S	V	S	S	N	L	P	D	K	Y	K	G	N	P	I	I	D	F	R	N	N	I	I	I	P	G	M	N	D	L	H	A	H	A	S	Q	Y	K	N	L	G	I	G	M	D	K	E
Template Known Secondary structure															T	T														T	T							S	S			G	G	G	T	T	S																					G	G	G	G	G	G	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		76	.	.	.																						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		L	L	P	W	L	N	N	Y	T	F	P	E	E	A	K	F	L	N	V	D	Y	A	K	K	T	Y	G	R	L	I	K	D	L	I	K	N	G	T	T	R	V	A	L	F	A	T	L	H	.	.	.	.	.	K	D	S	T	I	E	L	F	N	M	L	I	K	S	G	I	G	A	Y	V	G	K	V	N	M	D	Y
Template Known Secondary structure									T							G	G	G	S																		T	T										S		.	.	.	.	.															T												S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		L	N	L	V	K	K	G	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E	N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	.	.	.	.	.	P	A	E	V	I	S	K	L	A	N	A	G	I	V	V	S	A	G	H	S	N	A	T	L	K	E	A	K	A	G	F	R	A
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.
Template Conservation
Template Sequence		N	C	P	D	Y	L	T	E	N	Y	I	T	S	L	N	D	T	E	E	I	I	L	K	Y	K	D	K	S	N	I	V	K	P	I	I	T	P	R	F	V	P	S	C	S	N	E	L	M	D	G	L	G	K	L	S	Y	K	Y	R	L	P	V	Q	S	H	L	S	E	N	L	D	E	I	A	V	V	K	S	L	H
Template Known Secondary structure		S			T	T	S																			T	T	T		S	S					B					G	G	G																	T								S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	P	G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G	L	H	V	D	Y	A	N	I	R	N	A	K	R	L	K	G	D	K	L	C	L	V	T	D	A	T	A	P	A	G	A	N	I	E	Q	F	I	F	A	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.																						.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.																						.	.
Template Sequence		K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	S	N	F	Y	G	E	V	Y	D	K	F	G	L	F	G	N	T	P	T	L	M	A	H	C	I	H	S	S	K	E	E	I	N	L	I	K	R	N	.	.	.	N	V	T	I	V	H	C	P	T	S	N	F	N	L	G	S	G	M	M	P	V	.	.
Template Known Secondary structure		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S	S								T	T		S	S	S	S									S												T	.	.	.	T													T	T							.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.																						.	.
Template SS confidence
		245															.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.													.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	I	Y	Y	R	N	G	L	C	V	D	E	N	G	T	L	S	G	S	S	L	T	M	I	E	G	V	R	N	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	H	C	G	I	A	L	D	E	V	L	R	M	A	T	L	Y	P	A	R	A	I	G	V	E	K	R	L	G	T	L	A	A	G	K	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		R	K	Y	L	N	L	G	I	N	V	V	L	G	S	D	I	S	A	G	H	T	C	S	L	F	K	V	I	A	Y	A	I	Q	N	S	K	I	K	W	Q	E	S	G	K	K	D	M	F	L	S	T	S	E	A	F	Y	M	A	T	K	K	G	G	S	F	F	G	.	.	.	K	V	G	S	F	E	E	G	Y	D
Template Known Secondary structure							T	T									B	T	T	B			S																				T	T	S		S													T					T	T	T	S	.	.	.	S		S	S		S	T	T		B
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.
		358	.	360	.	.	.	.	.	.	.																							.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	L	T	A	F	T	P	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	K	T	I	V	N	G	N	E	V	V
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	A	L	V	I	N	D	S	N	L	Y	P	E	D	Y	D	L	T	E	R	L	E	R	F	I	Y	L	G	D	D	R	N	I	M	K	R	Y	V	C	G	N	E	I	F
Template Known Secondary structure										T	T	S		G	G	G	S															G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.