|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | H | F | T | F | H | I | T | D | K | S | D | A | S | D | I | R | E | V | . |
. |
. |
. |
. |
. |
E | T | R | A | F | G | F | S | K | E | A | D | L | V | A | S | L | L | E | D | E | S | A | R | P | A | L | S | L | L | A | R | Y | E | G | K | A | V | G | H | I | L | F | T | R | A | T | F | K | G | E | M | D | S | P |
Query Conservation |   |
  |   |   |
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |
| . | . | . | . | . | . |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
Template Conservation |   |
  |   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |
Template Sequence |   |
X | Q | L | S | H | R | P | A | E | T | G | D | L | E | T | V | A | G | F | P | Q | D | R | D | E | L | F | Y | C | Y | P | K | A | I | W | P | F | S | V | A | Q | L | A | A | A | I | A | E | R | R | G | S | . |
T | V | A | V | H | D | G | Q | V | L | G | F | A | N | F | Y | Q | W | Q | . |
. |
. |
. |
. |
. |
H | G |
Template Known Secondary structure |   |
|
|
|  |  |  |  |
|
| G | G | G |  |  |  |  |  | T |
|
|
| S |  |  |  |  |  |  |  |
| T | T |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  | S |  |  |  | . |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |
| . | . | . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1001 | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | |
. | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | |
|
|
|
|
|
. | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | M | H | I | L | A | P | L | A | V | I | P | E | Y | Q | G | M | G | V | G | G | R | L | I | R | T | G | I | E | H | L | R | L | M | . |
G | C | Q | T | V | F | V | L | G | H | A | T | . |
. |
. |
. |
. |
. |
Y | Y | P | R | H | G | F | E | P | C | A | G | D | K | G | Y | P | A | P | Y | P | I | P | E | E | H | K |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   | . |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |
|   |   |   |   |
Template Sequence |   |
D | F | C | A | L | G | N | X | X | V | A | P | A | A | R | G | L | G | V | A | R | Y | L | I | G | V | X | E | N | L | A | R | E | Q | Y | K | A | R | L | X | K | I | S | C | F | N | A | N | A | A | G | L | L | L | Y | T | Q | L | G | Y | Q | P | R | A | I | A | E | R | H | . |
. |
. |
D | P | D | G | R | R | V | A |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | . | . | . |
| T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|  |  |  |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1074 | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | |
|
|
. | . | . | . | . | . | . | 1150 |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | C | W | M | M | Q | S | L | T | A |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | I | Q | X | D | K | P | L | E | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
1151 | . | . | . | . | . | . | . | . | 1160 |
  |