Job Description P39368 Confidence 99.71% Date Thu Jan 5 12:00:00 GMT 2012 Rank 44 Aligned Residues 134 % Identity 17% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.									.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.
Query Sequence		H	F	T	F	H	I	T	D	K	S	D	A	S	D	I	R	E	V	E	T	R	A	F	.	.	.	.	.	.	.	.	G	F	S	K	E	A	D	L	V	A	S	L	L	E	D	E	S	A	R	P	A	L	S	L	L	A	R	Y	E	G	K	A	V	G	H	I	L	F	T	R	A	T	F	K	G	E	M	D	S
Query Conservation																									.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																																											.	.
Template Conservation																																																																											.	.
Template Sequence		S	V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	E	Q	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	.	.	P	A	P	K	L
Template Known Secondary structure										G	G	G	G	G	G	G													G	G	G														T	T	T	S	T	T											T	T												S	.	.			G	G	G
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		P	L	M	H	I	L	A	P	L	A	V	I	P	E	Y	Q	G	M	G	V	G	G	R	L	I	R	T	G	I	E	H	L	R	L	M	G	C	Q	T	V	F	V	L	G	H	A	T	.	.	.	.	.	.	Y	Y	P	R	H	G	F	E	P	C	A	G	D	K	G	Y	P
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	Q	X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L	X	K	H	L	A	T	I	A	I	T	H	N	C	Q	R	L	D	W	T	A	E	S	T	N	P	T	A	G	K	F	Y	K	S	I	G	A	S	L	I	R	E	K	E	Y	Y	R
Template Known Secondary structure														G	G	G	T	T	S																	T	T										T	T											T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions