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Job DescriptionP39368
Confidence99.85%DateThu Jan 5 12:00:00 GMT 2012
Rank6Aligned Residues154
% Identity19%Templatec2reeB_
PDB info PDB header:transferase, lyaseChain: B: PDB Molecule:cura; PDBTitle: crystal structure of the loading gnatl domain of cura from lyngbya2 majuscula
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60......... 70
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Query Sequence  HHFTFHITDKSDASDIREVETRAFGFSKEADLVASLLEDESARPALSLLARYEGKAVGHILFTRAT. . . . . . . . . . . . . F
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Template Sequence  NYYNLRHPKIEDLRDLIALETLCWSEN. LQVDNEEIYRRIFKIPQGQFILELEDKIVGAIYSQRIDNPQLLDNKTCTQVP
Template Known Secondary structure 




GGGS
TT.T



GGG
TTS
GGGGTT

TTTGG
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   226...230.........240.........250.. .......260.........270.........280.........290.........300....
 
   71........80.........90.........100.........110. ........120..
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Query Sequence  KGEMDSPLMHILAPLAVIPEYQGMGVGGRLIRTGIEHLRLM. GCQTVFVLGHA. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLHTESGVVVQLLAVNILPELQNQGLGDRLLEFMLQYCAQISGVEKVVAVTLCRNYPDYSPMPMAEYIHQKNESGLLVDP
Template Known Secondary structure  GG

TT
S
TTSTTSSTTSTT



SSGGGGTTS
TT
B
TTS
BSS
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   305....310.........320.........330.........340.........350.........360.........370.........380....
 
   123......130.........140.........150.........
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Query Sequence  . . TYYPRHGFEPCAGDKGYPAPYPIPEEHKACWMMQSLT
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Template Sequence  LLRFHQIHGAKIEKLLPGYR. PKDWENQTCGVLVSYDIQ
Template Known Secondary structure  TT
TTS
.TT
GGGTT


T
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   385....390.........400.... .....410.........420..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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