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Job DescriptionP37353
Confidence100.00%DateThu Jan 5 11:55:31 GMT 2012
Rank21Aligned Residues447
% Identity22%Templatec3tsyA_
PDB info PDB header:ligase, transferaseChain: A: PDB Molecule:fusion protein 4-coumarate--coa ligase 1, resveratrol PDBTitle: 4-coumaroyl-coa ligase::stilbene synthase fusion protein
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20... ......30.........40.........50.........60.........70........
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Query Sequence  MIFSDWPWRHWRQVRGETIALRL. . NDEQLNWRELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGAR
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Template Sequence  LSLHDYIFQN. ISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGAT
Template Known Secondary structure  S
TTT.GGGTTTSTTT

TT

TT

SS
T
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   61........70 .........80.........90.........100.........110.........120.........130.........
 
   7980.........90.........100.........110 .........120........
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Query Sequence  VLPVNPQLPQPLLEELLPNLTLQFALVPDGEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TFPALTSLHIQLVEGAHA
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Template Sequence  ATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASEVIDS
Template Known Secondary structure 
TTS
T
STTTTTSTS





TTS


TTGGGTSS

SGGGGGS

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   140.........150.........160.........170.........180.........190.........200.........210.........
 
   129130.........140.........150.........160......... 170.........180.........190. ........200...
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Query Sequence  ATWQPTRLCSMTLTSGSTGLPKAAVHTYQAHLASAQGVLSL. . . . IPFGDHDDWLLSLPLFHVSGQG. IMWRWLYAGARM
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Template Sequence  VEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAI
Template Known Secondary structure  S


TTS

B


SSSS

B
SSS
SS


SS

S
SSSTT
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   220.........230.........240.........250.........260.........270.........280.........290.........
 
   204.....210..... ....220.........230.. .......240.........250.........260. ........270.
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Query Sequence  TVRDKQPLEQML. . . . . AGCTHASLVPTQLWRLL. . . . . VNRSSVSLKAVLLGGAAIPVELTEQAREQ. . GIRCFCGYGL
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Template Sequence  LIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGM
Template Known Secondary structure 
SS

T



GGGGTS

TT

SS



SS
TT


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   300.........310.........320.........330.........340.........350.........360.........370.........
 
   272.......280 .........290.........300... ......310.........320........ .330.
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Query Sequence  TEFASTVCA. . . . . . . KEADGLADVGSPLPGREVKIVNN. . . . . . . . . . . . EVWLRAASMAEGYWRNGQLVSLVND. EGW
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Template Sequence  TEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGW
Template Known Secondary structure  GGG
S
GGGSSS




TT



SS

TTS

B

TT

STTS
STT
B
TTS
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   380.........390.........400.........410.........420.........430.........440.........450.........
 
   332.......340 .........350.........360.........370.........380.........390.........400.........410
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Query Sequence  YATRDRGEM. HNGKLTIVGRLDNLFFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGHRPVAVMEYDHESVDLSEW
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Template Sequence  LHTGDIGLIDDDDELFIVDRLKEASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYA. . . DYYFKVTKSEHMTALKKK
Template Known Secondary structure 
TTS
S



S

S


S
...TT
TT
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   460.........470.........480.........490.........500.........510........ .520.........530......
 
   411........420.........430.........440.........450.
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Query Sequence  VKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQQ
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Template Sequence  FNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQE
Template Known Secondary structure  T



S


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   643......650.........660.........670.........680...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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