Job Description P37353 Confidence 100.00% Date Thu Jan 5 11:55:31 GMT 2012 Rank 20 Aligned Residues 418 % Identity 23% Template c3nyrA_ PDB info PDB header:ligase Chain: A: PDB Molecule:malonyl-coa ligase; PDBTitle: malonyl-coa ligase ternary product complex with malonyl-coa and amp2 bound Resolution 1.45 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	W	R	H	W	R	Q	V	R	G	E	T	I	A	L	R	L	N	D	E	Q	L	N	W	R	E	L	C	A	R	V	D	E	L	A	S	G	F	A	V	Q	G	V	V	E	G	S	G	V	M	L	R	A	W	N	T	P	Q	T	L	L	A	W	L	A	L	L	Q	C	G	A	R	V	L	P	V	N	P	Q	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		L	S	P	A	P	T	G	A	P	A	D	R	P	A	L	R	F	G	E	R	S	L	T	Y	A	E	L	A	A	A	A	G	A	T	A	G	R	I	.	.	.	.	.	.	.	.	G	R	V	A	V	W	A	T	P	A	M	E	T	G	V	A	V	V	A	A	L	L	A	G	V	A	A	V	P	L	N	P	K	S
Template Known Secondary structure		T	S	S								T	S						T	T																		T		.	.	.	.	.	.	.	.									S	S														T								T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		P	Q	P	L	L	E	E	L	L	P	N	L	T	L	Q	F	A	L	V	P	D	G	E	N	T	F	P	A	L	T	S	L	H	I	Q	L	.	.	.	.	.	V	E	G	A	H	A	A	T	W	Q	P	T	R	L	C	S	M	T	L	T	S	G	S	T	G	L	P	K	A	A	V	H	T	Y	Q	A	H	L	A
Query Conservation																																						.	.	.	.	.
Alig confidence																																						.	.	.	.	.
Template Conservation
Template Sequence		G	D	K	E	L	A	H	I	L	S	D	S	A	P	S	L	V	L	A	P	P	D	A	E	L	P	P	A	L	G	A	L	E	R	V	D	V	D	V	R	A	R	G	A	V	P	E	D	G	A	D	D	G	D	P	A	L	V	V	Y	T	S	G	T	T	G	P	P	K	G	A	V	I	P	R	R	A	L	A	T
Template Known Secondary structure																S						T	T					G	G	G	T	T	S							T	T												T	T	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																			.	.	.	.																								.	.	.	.
Query SS confidence																																																			.	.	.	.																								.	.	.	.
Query Sequence		S	A	Q	G	V	L	S	L	I	P	F	G	D	H	D	D	W	L	L	S	L	P	L	F	H	V	S	G	Q	G	I	M	W	R	W	L	Y	A	G	A	R	M	T	V	R	D	K	Q	P	.	.	.	.	L	E	Q	M	L	A	G	C	T	H	A	S	L	V	P	T	Q	L	W	R	L	L	V	.	.	.	.
Query Conservation																																																			.	.	.	.																								.	.	.	.
Alig confidence																																																			.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		T	L	D	A	L	A	D	A	W	Q	W	T	G	E	D	V	L	V	Q	G	L	P	L	F	H	V	H	G	L	V	L	G	I	L	G	P	L	R	R	G	G	S	V	R	H	L	G	R	F	S	T	E	G	A	A	R	E	L	N	D	G	A	T	M	L	F	G	V	P	T	M	Y	H	R	I	A	E	T	L	P
Template Known Secondary structure											T			T	T									T	T	S					T	T	T	T							T							S	S											T	T	T																		G	G
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
							234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.	.	.																												.																												.	.														.	.	.	.	.
Query SS confidence		.	.	.	.	.																												.																												.	.														.	.	.	.	.
Query Sequence		.	.	.	.	.	N	R	S	S	V	S	L	K	A	V	L	L	G	G	A	A	I	P	V	E	L	T	E	Q	A	R	E	.	Q	G	I	R	C	F	C	G	Y	G	L	T	E	F	A	S	T	V	C	A	K	E	A	D	G	L	A	.	.	D	V	G	S	P	L	P	G	R	E	V	K	I	.	.	.	.	.
Query Conservation		.	.	.	.	.																												.																												.	.														.	.	.	.	.
Alig confidence		.	.	.	.	.																												.																												.	.														.	.	.	.	.
Template Conservation
Template Sequence		A	D	P	E	L	A	K	A	L	A	G	A	R	L	L	V	S	G	S	A	A	L	P	V	H	D	H	E	R	I	A	A	A	T	G	R	R	V	I	E	R	Y	G	M	T	E	T	L	M	N	T	S	V	R	A	D	G	E	P	R	A	G	T	V	G	V	P	L	P	G	V	E	L	R	L	V	P	I	A	A
Template Known Secondary structure		G												S						S	S															S										G	G	G								T	T	S				T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
						301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.	.	.																										.	.																											.
Query SS confidence		.	.	.	.																										.	.																											.
Query Sequence		.	.	.	.	V	N	N	E	V	W	L	R	A	A	S	M	A	E	G	Y	W	R	N	G	Q	L	V	S	L	.	.	V	N	D	E	G	W	Y	A	T	R	D	R	G	E	M	H	N	G	K	L	T	I	V	G	R	L	.	D	N	L	F	F	S	G	G	E	G	I	Q	P	E	E	V	E	R	V	I	A	A
Query Conservation		.	.	.	.																										.	.																											.
Alig confidence		.	.	.	.																										.	.																											.
Template Conservation
Template Sequence		L	D	G	E	S	V	G	E	I	Q	V	R	G	P	N	L	F	T	E	Y	L	N	R	P	D	A	T	A	A	A	F	T	E	D	G	F	F	R	T	G	D	M	A	V	R	D	P	D	G	Y	V	R	I	V	G	R	K	A	T	D	L	I	K	S	G	G	Y	K	I	G	A	G	E	I	E	N	A	L	L	E
Template Known Secondary structure				S										S	T	T	S					T	T								T	B		T	T	S												T	T	S								S	S							T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.						.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		H	P	A	V	L	Q	V	F	I	V	P	V	A	D	K	E	F	G	H	R	P	V	A	V	M	E	Y	D	H	.	.	.	.	.	E	S	V	D	L	S	E	W	V	K	D	K	L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L	K
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence		H	P	E	V	R	E	A	A	V	T	G	E	P	D	P	D	L	G	E	R	I	V	A	W	I	V	P	A	D	P	A	A	P	P	A	L	G	T	L	A	D	H	V	A	A	R	L	A	P	H	K	R	P	R	V	V	R	Y	L	D	A	V	P	R
Template Known Secondary structure		S	T	T												T	T	T											S	S	T	T	S															T		G	G	G	S		S						S
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.