Job Description P37353 Confidence 100.00% Date Thu Jan 5 11:55:31 GMT 2012 Rank 10 Aligned Residues 445 % Identity 23% Template c3ni2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:4-coumarate:coa ligase; PDBTitle: crystal structures and enzymatic mechanisms of a populus tomentosa 4-2 coumarate:coa ligase Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		M	I	F	S	D	W	P	W	R	H	W	R	Q	V	R	G	E	T	I	A	L	R	L	.	.	N	D	E	Q	L	N	W	R	E	L	C	A	R	V	D	E	L	A	S	G	F	A	V	Q	G	V	V	E	G	S	G	V	M	L	R	A	W	N	T	P	Q	T	L	L	A	W	L	A	L	L	Q	C	G	A	R
Query Conservation																									.	.
Alig confidence							.																		.	.
Template Conservation							.
Template Sequence		L	P	L	H	S	.	Y	V	L	E	N	L	S	N	H	S	S	K	P	C	L	I	N	G	A	N	G	D	V	Y	T	Y	A	D	V	E	L	T	A	R	R	V	A	S	G	L	N	K	I	G	I	Q	Q	G	D	V	I	M	L	F	L	P	S	S	P	E	F	V	L	A	F	L	G	A	S	H	R	G	A	I
Template Known Secondary structure							.			T	T	T	G	G	G	S	T	T	S						T	T	T																							T	T			T	T									S	S														T
Template Predicted Secondary structure							.
Template SS confidence
		22	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	P	V	N	P	Q	L	P	Q	P	L	L	E	E	L	L	P	N	L	T	L	Q	F	A	L	V	P	D	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	F	P	A	L	T	S	L	H	I	Q	L	V	E	G	A	H	A	A	T	W	Q	P	T	R	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	A	A	N	P	F	S	T	P	A	E	L	A	K	H	A	K	A	S	R	A	K	L	L	I	T	Q	A	C	Y	Y	E	K	V	K	D	F	A	R	E	S	D	V	K	V	M	C	V	D	S	A	P	D	G	C	L	H	F	S	E	L	T	Q	A	D	E	N	E	A	P	Q	V	D	I	S	P	D	D	V
Template Known Secondary structure							T	T														T								G	G	G	T											T						S	S				T	T				T					T	S		G	G	G								T	T	S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		C	S	M	T	L	T	S	G	S	T	G	L	P	K	A	A	V	H	T	Y	Q	A	H	L	A	S	A	Q	G	V	L	S	.	.	.	.	.	L	I	P	F	G	D	H	D	D	W	L	L	S	L	P	L	F	H	V	S	G	Q	G	I	M	W	R	W	L	Y	A	G	A	R	M	T	V	R	D	K	Q	P	L
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.
Template Conservation
Template Sequence		V	A	L	P	Y	S	S	G	T	T	G	L	P	K	G	V	M	L	T	H	K	G	L	I	T	S	V	A	Q	Q	V	D	G	D	N	P	N	L	Y	F	H	S	E	D	V	I	L	C	V	L	P	M	F	H	I	Y	A	L	N	S	I	M	L	C	G	L	R	V	G	A	P	I	L	I	M	P	K	F	E	I
Template Known Secondary structure									T	T	S	S	S																					S	S	S		S	S				T	T							S		T	T	S							T								T							S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		212	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																		.	.	.	.	.																														.	.
Query SS confidence						.	.	.	.	.																		.	.	.	.	.																														.	.
Query Sequence		E	Q	M	L	.	.	.	.	.	A	G	C	T	H	A	S	L	V	P	T	Q	L	W	R	L	L	.	.	.	.	.	V	N	R	S	S	V	S	L	K	A	V	L	L	G	G	A	A	I	P	V	E	L	T	E	Q	A	R	E	Q	.	.	G	I	R	C	F	C	G	Y	G	L	T	E	F	A	S	T	V	C
Query Conservation						.	.	.	.	.																		.	.	.	.	.																														.	.
Alig confidence						.	.	.	.	.																		.	.	.	.	.																														.	.
Template Conservation
Template Sequence		G	S	L	L	G	L	I	E	K	Y	K	V	S	I	A	P	V	V	P	P	V	M	M	S	I	A	K	S	P	D	L	D	K	H	D	L	S	S	L	R	M	I	K	S	G	G	A	P	L	G	K	E	L	E	D	T	V	R	A	K	F	P	Q	A	R	L	G	Q	G	Y	G	M	T	E	A	G	P	V	L	A
Template Known Secondary structure												T																T		S		G	G	G	S			T	T								S	S															T	T	S									G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		280								.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.													.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence			.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		A	.	.	.	.	.	.	.	K	E	A	D	G	L	A	D	V	G	S	P	L	P	G	R	E	V	K	I	V	N	N	.	.	.	.	.	.	.	.	.	.	.	.	E	V	W	L	R	A	A	S	M	A	E	G	Y	W	R	N	G	Q	L	V	S	L	V	N	D	E	.	.	G	W	Y	A	T	R	D	R	G
Query Conservation			.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence			.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		M	C	L	A	F	A	K	E	P	F	D	I	K	P	G	A	C	G	T	V	V	R	N	A	E	M	K	I	V	D	P	E	T	G	A	S	L	P	R	N	Q	P	G	E	I	C	I	R	G	D	Q	I	M	K	G	Y	L	N	D	P	E	A	T	S	R	T	I	D	K	E	G	W	L	H	T	G	D	I	G	Y
Template Known Secondary structure				G	G	G	S	S	S						T	T							S	S								T	T	T			B			T	T									S	T	T	S		S			T	T									B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.					.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.
Query SS confidence																																																																		.	.	.	.
Query Sequence		E	M	H	N	G	K	L	T	I	V	G	R	L	D	N	L	F	F	S	G	G	E	G	I	Q	P	E	E	V	E	R	V	I	A	A	H	P	A	V	L	Q	V	F	I	V	P	V	A	D	K	E	F	G	H	R	P	V	A	V	M	E	Y	D	H	.	.	.	.	E	S	V	D	L	S	E	W	V	K	D	K
Query Conservation																																																																		.	.	.	.
Alig confidence																																																																		.	.	.	.
Template Conservation
Template Sequence		I	D	D	D	D	E	L	F	I	V	D	R	L	K	E	L	I	K	Y	K	G	F	Q	V	A	P	A	E	L	E	A	L	L	I	A	H	P	E	I	S	D	A	A	V	V	G	L	K	D	E	D	A	G	E	V	P	V	A	F	V	V	K	S	E	K	S	Q	A	T	E	D	E	I	K	Q	Y	I	S	K	Q
Template Known Secondary structure				T	T	S									S						T	T														T	S	T	T												T	T	T												T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L	K	N	G	G	I	K	I	S	R	Q	A	L	K	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	F	Y	K	R	I	K	R	V	F	F	I	E	A	I	P	K	A	P	S	G	K	I	L	R	K	N	L	K	E	K
Template Known Secondary structure		S		G	G	G			S						S				B		T	T	S		B							T
Template Predicted Secondary structure
Template SS confidence
		501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.