Job Description P37353 Confidence 100.00% Date Thu Jan 5 11:55:31 GMT 2012 Rank 14 Aligned Residues 449 % Identity 18% Template c3kxwA_ PDB info PDB header:ligase Chain: A: PDB Molecule:saframycin mx1 synthetase b; PDBTitle: the crystal structure of fatty acid amp ligase from legionella2 pneumophila Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		I	F	S	D	W	P	W	R	H	W	R	Q	V	R	G	E	T	I	A	L	R	L	N	D	.	.	.	.	E	Q	L	N	W	R	E	L	C	A	R	V	D	E	L	A	S	G	F	A	V	Q	G	V	V	E	G	S	G	V	M	L	R	A	W	N	T	P	Q	T	L	L	A	W	L	A	L	L	Q	C	G	A
Query Conservation																										.	.	.	.
Alig confidence						.																				.	.	.	.
Template Conservation						.
Template Sequence		S	L	V	D	.	V	V	R	L	R	A	L	H	S	P	N	K	K	S	C	T	F	L	N	K	E	L	E	E	T	X	T	Y	E	Q	L	D	Q	H	A	K	A	I	A	A	T	L	Q	A	E	G	A	K	P	G	D	R	V	L	L	L	F	A	P	G	L	P	L	I	Q	A	F	L	G	C	L	Y	A	G	C
Template Known Secondary structure		S				.										T	T	S								T	T																								T	T			T	T									S	S													T	T
Template Predicted Secondary structure						.
Template SS confidence
		10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.													.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure													.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	L	P	V	N	P	Q	L	P	Q	.	.	.	P	L	L	E	E	L	L	P	N	L	T	L	Q	F	A	L	V	P	D	G	.	.	.	.	.	.	.	.	.	.	.	.	E	N	T	F	P	A	L	T	S	L	H	I	Q	L	V	E	G	A	H	A	A	T	W	Q	P	T	R	L	C	S	M	T	L	T
Query Conservation													.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	V	P	I	Y	P	P	A	Q	E	K	L	L	D	K	A	Q	R	I	V	T	N	S	K	P	V	I	V	L	X	I	A	D	H	I	K	K	F	T	A	N	P	K	F	L	K	I	P	A	I	A	L	E	S	I	E	L	N	R	S	S	S	W	Q	P	T	S	I	K	S	N	D	I	A	F	L	Q	Y	T
Template Known Secondary structure											S																	S																			T	T						G	G	G			G	G	G	G	G	G								T	T	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		S	G	S	T	G	L	P	K	A	A	V	H	T	Y	Q	A	H	L	A	S	A	Q	G	V	L	S	L	I	P	F	G	D	H	D	D	W	L	L	S	L	P	L	F	H	V	S	G	Q	G	I	M	W	R	W	L	Y	A	G	A	R	M	T	V	R	.	.	.	.	.	.	.	.	D	K	Q	P	L	E	Q	M
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	S	T	X	H	P	K	G	V	X	V	S	H	H	N	L	L	D	N	L	N	K	I	F	T	S	F	H	X	N	D	E	T	I	I	F	S	W	L	P	P	H	H	D	X	G	L	I	G	C	I	L	T	P	I	Y	G	G	I	Q	A	I	X	X	S	P	F	S	F	L	Q	N	P	L	S	W	L	K	H
Template Known Secondary structure		S	S		S	S	S																						T	T			T	T							S		T	T	S						T	T	T							T															T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.											.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		L	A	G	C	T	H	A	S	L	V	P	T	Q	L	.	.	.	.	.	.	.	.	.	.	W	R	L	L	V	N	R	S	S	V	S	L	K	A	V	L	L	G	G	A	A	I	P	V	E	L	T	E	Q	A	R	E	Q	G	I	R	.	.	.	.	.	.	.	C	F	C	G	Y	G	L	T	E	F	A	S	T
Query Conservation																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	K	Y	K	A	T	I	S	G	S	P	N	F	A	Y	D	Y	C	V	K	R	I	R	E	E	K	K	E	G	L	D	L	S	S	W	V	T	A	F	N	G	A	E	P	V	R	E	E	T	X	E	H	F	Y	Q	A	F	K	E	F	G	F	R	K	E	A	F	Y	P	C	Y	G	L	A	E	A	T	L	L
Template Known Secondary structure						T		S						T												G	G	G	G	T	T				T	T								S	S															G	G	G	T			G	G	G								G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		278	.	280	.																												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.													.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	C	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	G	L	A	D	V	G	S	P	L	P	G	R	E	V	K	I	V	N	.	.	.	.	.	.	.	.	.	.	.	.	N	E	V	W	L	R	A	A	S	M	A	E	G	Y	W	R
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	G	G	T	P	G	S	S	Y	K	T	L	T	L	A	K	E	Q	F	Q	D	H	R	V	H	F	A	D	D	N	S	P	G	S	Y	K	L	V	S	S	G	N	P	I	Q	E	V	K	I	I	D	P	D	T	L	I	P	C	D	F	D	Q	V	G	E	I	W	V	Q	S	N	S	V	A	K	G	Y	W	N
Template Known Secondary structure							T	T	S									S				S	S	S	B			B			T	T		T	T											S	S							T	T	T			B			T	T	B								S	T	T	S				B	T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		319	320	.	.	.	.	.	.	.							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																																																		.	.	.
Query SS confidence											.	.	.	.	.	.																																																		.	.	.
Query Sequence		N	G	Q	L	V	S	L	V	N	.	.	.	.	.	.	D	E	G	W	Y	A	T	R	D	R	G	E	M	H	N	G	K	L	T	I	V	G	R	L	D	N	L	F	F	S	G	G	E	G	I	Q	P	E	E	V	E	R	V	I	A	A	H	P	A	.	.	.	V	L	Q	V	F	I	V	P	V	A	D	K	E
Query Conservation											.	.	.	.	.	.																																																		.	.	.
Alig confidence											.	.	.	.	.	.																																																		.	.	.
Template Conservation
Template Sequence		Q	P	E	E	T	R	H	A	F	A	G	K	I	K	D	D	A	I	Y	L	R	T	G	D	L	G	F	L	H	E	N	E	L	Y	V	T	G	R	I	K	D	L	I	I	I	Y	G	K	N	H	Y	P	Q	D	I	E	F	S	L	X	H	S	P	L	H	H	V	L	G	K	C	A	A	F	V	I	Q	E	E	H
Template Known Secondary structure												B			T	T				B											T	T								S	S									T	T												S	G	G	G	G	G												T	T
Template Predicted Secondary structure
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.										.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		F	G	H	R	P	V	A	V	M	E	Y	D	H	E	.	.	.	.	.	.	.	.	.	S	V	D	L	S	E	W	V	K	D	K	L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L	K	N	G	G	I	K	I	S	R	Q	A	L	K	E	W	V	Q	R	Q	Q
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Y	K	L	T	V	X	C	E	V	K	N	R	F	X	D	D	V	A	Q	D	N	L	F	N	E	I	F	E	L	V	Y	E	N	H	Q	L	E	V	H	T	I	V	L	I	P	L	K	A	X	P	H	T	T	S	G	K	I	R	R	N	F	C	R	K	H	L	L	D	K	T
Template Known Secondary structure												S		T	T																						S											T	T		S				S																T
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.