Job Description P37353 Confidence 17.54% Date Thu Jan 5 11:55:31 GMT 2012 Rank 94 Aligned Residues 60 % Identity 22% Template c3g8qA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:predicted rna-binding protein, contains thump PDBTitle: a cytidine deaminase edits c-to-u in transfer rnas in2 archaea Resolution 2.40 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	F	I	V	P	V	A	D	K	E	F	G	H	R	P	V	A	V	M	E	Y	D	H	E	S	V	D	L	S	E	W	V	K	D	K	L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L	K	N	G	G	I	K	I	S	R	Q	A	L	K	E	W	V	Q	R
Query Conservation
Alig confidence																.	.																																.	.	.	.	.	.	.	.	.
Template Conservation																.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		D	A	D	I	A	P	A	P	E	N	L	S	G	R	.	.	V	E	I	M	V	T	R	G	D	P	D	E	A	V	E	L	L	K	E	E	L	P	V	F	R	I	R	R	F	L	I	.	.	.	.	.	.	.	.	.	S	G	E	F	D	R	D	E	L	R	E	R	I	L	E
Template Known Secondary structure								S	G	G	G		T	T		.	.								S													S	T	T	S						S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions