Return to main results Retrieve Phyre Job Id

Job DescriptionP37353
Confidence24.88%DateThu Jan 5 11:55:31 GMT 2012
Rank67Aligned Residues94
% Identity14%Templatec2zy3A_
PDB info PDB header:lyaseChain: A: PDB Molecule:l-aspartate beta-decarboxylase; PDBTitle: dodecameric l-aspartate beta-decarboxylase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40........ .50.........60......... 70.
Predicted Secondary structure 
.........






.








.
Query SS confidence 












. . . . . . . . .
































.




















.

Query Sequence  FSDWPWRHWRQVR. . . . . . . . . GETIALRLNDEQLNWRELCARVDELASGFAVQG. VVEGSGVMLRAWNTPQTLLAW. LA
Query Conservation    
      
   .........

  

       

 

       
  
   
.
  

 
 
   
        .

Alig confidence 












.........









........














.




















.

Template Conservation           
       
       
  
 
 ........  

      
     
 


 
 
  
 
        
 
Template Sequence  ISEKIVRQYIIREMGADAIPSESVNLFAVEGG. . . . . . . . TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELA
Template Known Secondary structure  TT
TTS
GGGS........TTSS
TT
S

TSTTST
Template Predicted Secondary structure 








........













Template SS confidence 















































































   143......150.........160.........170.... .....180.........190.........200.........210....
 
   72.......80..... ....90.........100.....
Predicted Secondary structure 





....





Query SS confidence 













. . . .



















Query Sequence  LLQCGARVLPVNPQ. . . . LPQPLLEELLPNLTLQFALV
Query Conservation      
   
 
   ....     
   
          
Alig confidence 













....









.








Template Conservation    
   
 
  
           
    .         
Template Sequence  QYALEEVAINADPSLNWQYPDSELDKLK. DPAIKIFFC
Template Known Secondary structure  TT


BGGGTSB

GGGG.
TT
Template Predicted Secondary structure 













.



Template SS confidence 





































   215....220.........230.........240.. .......250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions