Job Description P37353 Confidence 100.00% Date Thu Jan 5 11:55:31 GMT 2012 Rank 2 Aligned Residues 448 % Identity 21% Template c2vsqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:surfactin synthetase subunit 3; PDBTitle: structure of surfactin a synthetase c (srfa-c), a2 nonribosomal peptide synthetase termination module Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	S	D	W	P	W	R	H	W	R	Q	V	R	G	E	T	I	A	L	R	L	N	D	E	Q	L	N	W	R	E	L	C	A	R	V	D	E	L	A	S	G	F	A	V	Q	G	V	V	E	G	S	G	V	M	L	R	A	W	N	T	P	Q	T	L	L	A	W	L	A	L	L	Q	C	G	A	R	V	L	P
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		P	L	T	Y	.	W	F	K	E	A	V	N	A	N	P	D	A	P	A	L	T	Y	S	G	Q	T	L	S	Y	R	E	L	D	E	E	A	N	R	I	A	R	R	L	Q	K	H	G	A	G	K	G	S	V	V	A	L	Y	T	K	R	S	L	E	L	V	I	G	I	L	G	V	L	K	A	G	A	A	Y	L	P
Template Known Secondary structure						.										T	T	S					S	S	S																						T	T			T	T									S	S													T	T
Template Predicted Secondary structure						.
Template SS confidence
		465	.	.	.		.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.												.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	P	Q	L	P	Q	P	L	L	E	E	L	L	P	N	L	T	L	Q	F	A	L	V	P	D	G	E	N	T	F	P	A	.	.	.	.	.	.	.	.	.	.	.	L	T	S	L	H	I	Q	L	V	E	G	A	H	A	A	T	W	Q	P	T	R	L	C	S	M	T	L	T	S	G	S	T	G	L	P	K
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	P	K	L	P	E	D	R	I	S	Y	M	L	A	D	S	A	A	A	C	L	L	T	H	Q	E	M	K	E	Q	A	A	E	L	P	Y	T	G	T	T	L	F	I	D	D	Q	T	R	F	E	E	Q	A	S	D	P	A	T	A	I	D	P	N	D	P	A	Y	I	M	Y	T	S	G	T	T	G	K	P	K
Template Known Secondary structure				T	T	S													T								S	T	T		T	T	S	T	T					S					S	S		G	G	G	G	G	S		S	S								T	T	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		A	A	V	H	T	Y	Q	A	H	L	A	S	A	Q	G	V	L	S	L	I	P	F	G	D	H	D	D	W	L	L	S	L	P	L	F	H	V	S	G	Q	G	I	M	W	R	W	L	Y	A	G	A	R	M	T	V	R	D	K	Q	.	.	.	.	.	.	P	L	E	Q	M	L	A	G	C	T	H	A	S	L	V
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																			.																																										.	.	.	.	.	.
Template Conservation																			.
Template Sequence		G	N	I	T	T	H	A	N	I	Q	G	L	V	K	H	V	D	.	Y	M	A	F	S	D	Q	D	T	F	L	S	V	S	N	Y	A	F	D	A	F	T	F	D	F	Y	A	S	M	L	N	A	A	R	L	I	I	A	D	E	H	T	L	L	D	T	E	R	L	T	D	L	I	L	Q	E	N	V	N	V	M	F
Template Known Secondary structure															S	S			.	S	S				T	T							S		T	T	S	T											T	T	T								G	G	G	T	T													T
Template Predicted Secondary structure																			.
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640		.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
		225	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.							.	.	.	.	.	290	.	.
Predicted Secondary structure											.	.	.	.																													.	.																								.	.	.	.	.	.
Query SS confidence											.	.	.	.																													.	.																								.	.	.	.	.	.
Query Sequence		P	T	Q	L	W	R	L	L	V	.	.	.	.	N	R	S	S	V	S	L	K	A	V	L	L	G	G	A	A	I	P	V	E	L	T	E	Q	A	R	E	Q	.	.	G	I	R	C	F	C	G	Y	G	L	T	E	F	A	S	T	V	C	A	K	E	A	D	.	.	.	.	.	.	G	L	A	D	V	G	S	P
Query Conservation											.	.	.	.																													.	.																								.	.	.	.	.	.
Alig confidence											.	.	.	.																													.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	T	A	L	F	N	L	L	T	D	A	G	E	D	W	M	K	G	L	R	C	I	L	F	G	G	E	R	A	S	V	P	H	V	R	K	A	L	R	I	M	G	P	G	K	L	I	N	C	Y	G	P	T	E	G	T	V	F	A	T	A	H	V	V	H	D	L	P	D	S	I	S	S	L	P	I	G	K	P
Template Known Secondary structure															S					T		S						S	S																T	T									G	G	G	S	S		S										S	S		S	S				B
Template Predicted Secondary structure
Template SS confidence
		703	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.
		293	.	.	.	.	.	.	300	.	.												.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.								330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.													.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.													.
Query Sequence		L	P	G	R	E	V	K	I	V	N	.	.	.	.	.	.	.	.	.	.	.	N	E	V	W	L	R	A	A	S	M	A	E	G	Y	W	R	N	G	Q	L	V	S	L	V	N	D	E	.	.	.	.	.	.	.	G	W	Y	A	T	R	D	R	G	E	M	H	.	N	G	K	L	T	I	V	G	R	L	D	N
Query Conservation												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.													.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		I	S	N	A	S	V	Y	I	L	N	E	Q	S	Q	L	Q	P	F	G	A	V	G	E	L	C	I	S	G	M	G	V	S	K	G	Y	V	N	R	A	D	L	T	K	E	K	F	I	E	N	P	F	K	P	G	E	T	L	Y	R	T	G	D	L	A	R	W	L	P	D	G	T	I	E	Y	A	G	R	I	D	D
Template Known Secondary structure			T	T								T	T	S		B			T	T										T	T					B	T	T													T	T	S	T	T														T	T	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		L	F	F	S	G	G	E	G	I	Q	P	E	E	V	E	R	V	I	A	A	H	P	A	V	L	Q	V	F	I	V	P	V	A	D	K	E	F	G	H	R	P	V	A	V	M	E	Y	D	H	.	.	E	S	V	D	L	S	E	W	V	K	D	K	L	A	R	F	Q	Q	P	V	R	W	L	T	L	P	P	E	L
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		Q	V	K	I	R	G	H	R	I	E	L	E	E	I	E	K	Q	L	Q	E	Y	P	G	V	K	D	A	V	V	V	A	D	R	H	E	S	G	D	A	S	I	N	A	Y	L	V	N	R	T	Q	L	S	A	E	D	V	K	A	H	L	K	K	Q	L	P	A	Y	M	V	P	Q	T	F	T	F	L	D	E	L	P
Template Known Secondary structure						T	T															S	S	S												S	S	S											S	S	S	S													S		G	G	G	S		S						S
Template Predicted Secondary structure
Template SS confidence
		863	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	G	G	I	K	I	S	R	Q	A	L	K	E	W	V	Q	R	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	N	G	K	V	N	K	R	L	L	P	K	P	D	Q	D	Q	L
Template Known Secondary structure				S	S		S	S			S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		943	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.